STIFDB - 1000bp Information | TAIR Gene ID: AT3G53500


STIFdb - 1000bp TFmap : AT3G53500

AT3G53500_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G53500

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.48520.607/ 24622 465470 5'UTRReverse
2 Myb_box5_MYB 2.48520.607/ 24622 -437-432 Upstream regionForward
3 G_box_bHLH 2.95011.846/ 24622 -666-661 Upstream regionForward
4 Myb_box2_MYB 2.48403.367/ 24622 -438-433 Upstream regionReverse
5 Myb_box2_MYB 2.48403.367/ 24622 -830-825 Upstream regionReverse
6 GCC_box_AP2_EREBP 3.911514.874/ 24622 -434-429 Upstream regionReverse
7 GCC_box_AP2_EREBP 3.911514.874/ 24622 -795-790 Upstream regionForward
8 GCC_box_AP2_EREBP 3.911514.874/ 24622 -806-801 Upstream regionReverse
9 G_box2_bZIP 2.42811.945/ 24622 6570 5'UTRReverse
10 Nac_box_NAC 2.37691.785/ 24622 -941-936 Upstream regionForward
11 Myb_box1_MYB 2.50410.747/ 24622 465470 5'UTRReverse
12 Myb_box4_MYB 2.38682.831/ 24622 279285 5'UTRForward
13 W_box_WRKY 1.82960.806/ 24622 -184-179 Upstream regionForward


Details about the Gene : AT3G53500:


TAIR IDAT3G53500
Alternate NamesRSZ32
Chromosome Position19848067-19846875(chr3)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
Nac_box_NAC
G_box_bHLH
GCC_box_AP2_EREBP
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-COLD, RARGE-NACL
References --


Download Sequence Data :

Click here to download AT3G53500 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012