STIFDB - 1000bp Information | TAIR Gene ID: AT3G53260


STIFdb - 1000bp TFmap : AT3G53260

AT3G53260_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G53260

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 3.05590.607/ 24622 -104-99 Upstream regionForward
2 Myb_box5_MYB 3.05590.607/ 24622 -329-324 Upstream regionForward
3 Myb_box2_MYB 2.84081.684/ 24622 -330-325 Upstream regionReverse
4 DREB_AP2_EREBP 3.00233.975/ 24622 -281-276 Upstream regionReverse
5 DREB_AP2_EREBP 3.00233.975/ 24622 -288-283 Upstream regionReverse
6 Myb_box1_MYB 3.22610.747/ 24622 -104-99 Upstream regionForward
7 Myb_box4_MYB 2.73228.493/ 24622 -222-216 Upstream regionReverse
8 Myb_box4_MYB 2.73228.493/ 24622 -382-376 Upstream regionReverse
9 Myb_box4_MYB 2.73228.493/ 24622 -217-211 Upstream regionReverse
10 AuxRE_ARF 2.96351.059/ 24622 -348-343 Upstream regionForward
11 N_box_bHLH 2.99102.927/ 24622 -277-272 Upstream regionForward
12 HSE1_HSF 0.27130.668/ 24622 148155 5'UTRForward
13 W_box_WRKY 1.62810.806/ 24622 -429-424 Upstream regionForward


Details about the Gene : AT3G53260:


TAIR IDAT3G53260
Alternate NamesPAL2
Chromosome Position19757759-19757598(chr3)
Transcription FactorsMyb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
DREB_AP2_EREBP
N_box_bHLH
Myb_box4_MYB
Experimental Data from
Microarray Database
DRASTIC-COLD, RARGE-COLD, RARGE-DROUGHT, RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT3G53260 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012