STIFDB - 1000bp Information | TAIR Gene ID: AT3G52850


STIFdb - 1000bp TFmap : AT3G52850

AT3G52850_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G52850

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.23560.987/ 24622 -598-593 Upstream regionReverse
2 Myb_box5_MYB 2.23560.987/ 24622 -971-966 Upstream regionReverse
3 G_box_bHLH 3.68363.000/ 24622 -275-270 Upstream regionForward
4 DREB_AP2_EREBP 3.03143.230/ 24622 -600-595 Upstream regionReverse
5 N_box_bHLH 3.76484.757/ 24622 -768-763 Upstream regionReverse
6 AuxRE_ARF 2.88873.441/ 24622 97102 5'UTRReverse
7 AuxRE_ARF 2.88873.441/ 24622 -19-14 Upstream regionReverse
8 HSE1_HSF 1.78611.086/ 24622 -204-197 Upstream regionForward


Details about the Gene : AT3G52850:


TAIR IDAT3G52850
Alternate NamesATELP1, VACUOLAR SORTING RECEPTOR HOMOLOG, ATELP, BP-80, VSR-1
Chromosome Position19597799-19598976(chr3)
Transcription FactorsHSE1_HSF
Myb_box5_MYB
AuxRE_ARF
DREB_AP2_EREBP
G_box_bHLH
N_box_bHLH
Experimental Data from
Microarray Database
RARGE-ABA, RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT3G52850 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012