STIFDB - 1000bp Information | TAIR Gene ID: AT3G52590


STIFdb - 1000bp TFmap : AT3G52590

AT3G52590_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G52590

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.84540.493/ 24622 -977-972 Upstream regionForward
2 Myb_box2_MYB 2.83912.736/ 24622 -978-973 Upstream regionReverse
3 Myb_box1_MYB 1.37691.214/ 24622 -370-365 Upstream regionReverse
4 DREB_AP2_EREBP 2.74183.230/ 24622 -975-970 Upstream regionForward
5 Myb_box4_MYB 2.72944.601/ 24622 -984-978 Upstream regionReverse
6 W_box_WRKY 2.21981.310/ 24622 -536-531 Upstream regionForward
7 HSE1_HSF -0.03211.086/ 24622 -150-143 Upstream regionReverse
8 Myb_box3_MYB 2.14322.177/ 24622 -370-365 Upstream regionReverse


Details about the Gene : AT3G52590:


TAIR IDAT3G52590
Alternate NamesEMBRYO DEFECTIVE 2167, EMB2167, UBQ1, EARLY-RESPONSIVE TO DEHYDRATION 16, UBIQUITIN EXTENSION PROTEIN 1, ERD16
Chromosome Position19515607-19516645(chr3)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
DREB_AP2_EREBP
Myb_box4_MYB
Experimental Data from
Microarray Database
--
References Elizabeth A. Bray, 2002. Annals of Botany 89:803-811


Download Sequence Data :

Click here to download AT3G52590 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012