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STIFDB - 1000bp Information | TAIR Gene ID: AT3G50980

STIFdb - 1000bp TFmap : AT3G50980

AT3G50980_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT3G50980

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 HSE1_HSF 1.44430.611/ 5046 -543-536 Upstream region FORWARD
2 Myb_box5_MYB 1.90671.847/ 5046 -652-647 Upstream region REVERSE
3 Myb_box5_MYB 1.90671.847/ 5046 -307-302 Upstream region FORWARD
4 Myb_box5_MYB 1.90671.847/ 5046 -205-200 Upstream region REVERSE
5 Myb_box5_MYB 1.90671.847/ 5046 -650-645 Upstream region FORWARD
6 Myb_box5_MYB 1.90671.847/ 5046 -83-78 Upstream region REVERSE
7 Myb_box5_MYB 1.90671.847/ 5046 -839-834 Upstream region REVERSE
8 Myb_box5_MYB 1.90671.847/ 5046 -112-107 Upstream region FORWARD
9 Myb_box1_MYB 2.00601.805/ 5046 -112-107 Upstream region FORWARD
10 Myb_box1_MYB 2.00601.805/ 5046 -205-200 Upstream region REVERSE
11 Myb_box1_MYB 2.00601.805/ 5046 -650-645 Upstream region FORWARD
12 G_box_bHLH 3.20541.502/ 5046 -62-57 Upstream region FORWARD
13 G_box2_bZIP 2.74511.625/ 5046 -216-211 Upstream region REVERSE
14 N_box_bHLH 3.25052.510/ 5046 -720-715 Upstream region FORWARD
15 Nac_box_NAC 2.63071.438/ 5046 -105-100 Upstream region FORWARD

Details about the Gene : AT3G50980:


TAIR IDAT3G50980
Alternate NamesXERO1
Chromosome Position18941925-18942865 (chr3)
Transcription FactorsHSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
G_box_bHLH
G_box2_bZIP
N_box_bHLH
Nac_box_NAC
Experimental Data from
Microarray Database 		GEO-DROUGHT, GEO-NACL
References --

Download Sequence Data :

Click here to download AT3G50980 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012