STIFDB - 1000bp Information | TAIR Gene ID: AT3G50000


STIFdb - 1000bp TFmap : AT3G50000

AT3G50000_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G50000

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.72930.439/ 24622 -69-64 Upstream regionReverse
2 G_box_bHLH 3.38382.666/ 24622 1116 5'UTRReverse
3 GCC_box_AP2_EREBP 4.42057.162/ 24622 -496-491 Upstream regionForward
4 G_box2_bZIP 2.13165.618/ 24622 -527-522 Upstream regionForward
5 G_box2_bZIP 2.13165.618/ 24622 -969-964 Upstream regionForward
6 Myb_box3_MYB 2.09241.935/ 24622 -854-849 Upstream regionForward
7 Myb_box1_MYB 2.85731.079/ 24622 -69-64 Upstream regionReverse
8 AuxRE_ARF 2.81731.529/ 24622 -639-634 Upstream regionForward
9 HSE1_HSF 0.68550.965/ 24622 -387-380 Upstream regionReverse


Details about the Gene : AT3G50000:


TAIR IDAT3G50000
Alternate NamesCKA2, ATPK15D, CASEIN KINASE II, ALPHA CHAIN 2
Chromosome Position18544442-18545469(chr3)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
AuxRE_ARF
G_box_bHLH
GCC_box_AP2_EREBP
Experimental Data from
Microarray Database
RARGE-DROUGHT
References --


Download Sequence Data :

Click here to download AT3G50000 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012