STIFDB - 1000bp Information | TAIR Gene ID: AT3G48880


STIFdb - 1000bp TFmap : AT3G48880

AT3G48880_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G48880

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.04691.184/ 24622 -107-102 Upstream regionReverse
2 Myb_box5_MYB 2.04691.184/ 24622 -485-480 Upstream regionForward
3 Myb_box5_MYB 2.04691.184/ 24622 -752-747 Upstream regionReverse
4 Myb_box2_MYB 2.87462.189/ 24622 -183-178 Upstream regionForward
5 GCC_box_AP2_EREBP 4.64306.446/ 24622 -211-206 Upstream regionForward
6 Myb_box1_MYB 2.19760.971/ 24622 -107-102 Upstream regionReverse
7 DREB_AP2_EREBP 3.56502.584/ 24622 -165-160 Upstream regionReverse
8 Myb_box4_MYB 2.74703.680/ 24622 -18-12 Upstream regionReverse
9 AuxRE_ARF 2.80832.753/ 24622 259264 5'UTRReverse
10 AuxRE_ARF 2.80832.753/ 24622 119124 5'UTRForward


Details about the Gene : AT3G48880:


TAIR IDAT3G48880
Alternate NamesNIL(putative)
Chromosome Position18136855-18138857(chr3)
Transcription FactorsMyb_box1_MYB
Myb_box5_MYB
Myb_box2_MYB
AuxRE_ARF
DREB_AP2_EREBP
GCC_box_AP2_EREBP
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-ABA
References --


Download Sequence Data :

Click here to download AT3G48880 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012