STIFDB - 1000bp Information | TAIR Gene ID: AT3G48690


STIFdb - 1000bp TFmap : AT3G48690

AT3G48690_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G48690

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.01011.393/ 24622 -363-358 Upstream regionForward
2 Myb_box5_MYB 2.01011.393/ 24622 5560 5'UTRReverse
3 Myb_box5_MYB 2.01011.393/ 24622 -109-104 Upstream regionReverse
4 Myb_box5_MYB 2.01011.393/ 24622 -104-99 Upstream regionForward
5 Myb_box5_MYB 2.01011.393/ 24622 5762 5'UTRForward
6 Myb_box5_MYB 2.01011.393/ 24622 -25-20 Upstream regionForward
7 G_box_bHLH 3.31102.823/ 24622 -629-624 Upstream regionReverse
8 G_box_bHLH 3.31102.823/ 24622 -34-29 Upstream regionForward
9 Myb_box2_MYB 2.93151.287/ 24622 5661 5'UTRReverse
10 Myb_box1_MYB 2.07481.142/ 24622 -109-104 Upstream regionReverse
11 Myb_box1_MYB 2.07481.142/ 24622 -104-99 Upstream regionForward
12 Myb_box4_MYB 2.84572.165/ 24622 -360-354 Upstream regionReverse
13 AuxRE_ARF 2.70631.619/ 24622 -30-25 Upstream regionForward
14 AuxRE_ARF 2.70631.619/ 24622 -553-548 Upstream regionForward
15 HSE1_HSF 0.69971.022/ 24622 -189-182 Upstream regionForward
16 HSE1_HSF 0.69971.022/ 24622 -226-219 Upstream regionReverse
17 Myb_box3_MYB 2.06711.024/ 24622 -275-270 Upstream regionReverse


Details about the Gene : AT3G48690:


TAIR IDAT3G48690
Alternate NamesNIL(putative)
Chromosome Position18049220-18049146(chr3)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box2_MYB
AuxRE_ARF
G_box_bHLH
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-DROUGHT
References --


Download Sequence Data :

Click here to download AT3G48690 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012