STIFDB - 1000bp Information | TAIR Gene ID: AT3G46780


STIFdb - 1000bp TFmap : AT3G46780

AT3G46780_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G46780

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.13930.911/ 24622 -778-773 Upstream regionReverse
2 Myb_box5_MYB 2.13930.911/ 24622 -17-12 Upstream regionForward
3 Myb_box5_MYB 2.13930.911/ 24622 -670-665 Upstream regionForward
4 G_box2_bZIP 2.27031.945/ 24622 -88-83 Upstream regionForward
5 Myb_box3_MYB 2.24534.018/ 24622 -735-730 Upstream regionReverse
6 Myb_box3_MYB 2.24534.018/ 24622 -263-258 Upstream regionForward
7 Myb_box3_MYB 2.24534.018/ 24622 -500-495 Upstream regionForward
8 Myb_box1_MYB 2.26240.747/ 24622 -778-773 Upstream regionReverse
9 C_ABRE_bZIP 4.03058.688/ 24622 -439-434 Upstream regionForward
10 AuxRE_ARF 2.87641.059/ 24622 1318 5'UTRForward
11 N_box_bHLH 2.82522.927/ 24622 -836-831 Upstream regionReverse
12 HSE1_HSF 0.23800.668/ 24622 -650-643 Upstream regionForward
13 W_box_WRKY 2.33900.806/ 24622 -488-483 Upstream regionReverse


Details about the Gene : AT3G46780:


TAIR IDAT3G46780
Alternate NamesPLASTID TRANSCRIPTIONALLY ACTIVE18, PTAC16
Chromosome Position17238658-17239750(chr3)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
N_box_bHLH
C_ABRE_bZIP
Experimental Data from
Microarray Database
DRASTIC-COLD
References --


Download Sequence Data :

Click here to download AT3G46780 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012