STIFDB - 1000bp Information | TAIR Gene ID: AT3G28340


STIFdb - 1000bp TFmap : AT3G28340

AT3G28340_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G28340

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 3.08091.048/ 5046 -261-256 Upstream region FORWARD
2 Myb_box3_MYB 2.54095.340/ 5046 -756-751 Upstream region REVERSE
3 Myb_box3_MYB 2.54095.340/ 5046 -376-371 Upstream region REVERSE
4 Myb_box3_MYB 2.54095.340/ 5046 -338-333 Upstream region FORWARD
5 Myb_box3_MYB 2.54095.340/ 5046 -999-994 Upstream region REVERSE
6 HSE1_HSF 1.30650.654/ 5046 -28-21 Upstream region FORWARD
7 Myb_box5_MYB 2.50340.848/ 5046 -307-302 Upstream region FORWARD
8 Myb_box5_MYB 2.50340.848/ 5046 -381-376 Upstream region FORWARD
9 Myb_box5_MYB 2.50340.848/ 5046 -649-644 Upstream region REVERSE
10 Myb_box1_MYB 2.62330.645/ 5046 -381-376 Upstream region FORWARD
11 W_box_WRKY 2.59060.699/ 5046 -652-647 Upstream region FORWARD
12 G_box2_bZIP 2.62221.741/ 5046 -266-261 Upstream region REVERSE
13 Nac_box_NAC 3.24171.540/ 5046 -938-933 Upstream region FORWARD
14 Myb_box4_MYB 3.26973.029/ 5046 713 5`UTR REVERSE


Details about the Gene : AT3G28340:


TAIR IDAT3G28340
Alternate NamesGATL10, GATL10
Chromosome Position10588947-10590552 (chr3)
Transcription FactorsAuxRE_ARF
Myb_box3_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
G_box2_bZIP
Nac_box_NAC
Myb_box4_MYB
Experimental Data from
Microarray Database
GEO-COLD, GEO-DROUGHT, GEO-LIGHT, GEO-UV-B
References --


Download Sequence Data :

Click here to download AT3G28340 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012