STIFDB - 1000bp Information | TAIR Gene ID: AT3G25500


STIFdb - 1000bp TFmap : AT3G25500

AT3G25500_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G25500

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box3_MYB 2.14341.707/ 5106 -627-622 Upstream region FORWARD
2 Myb_box5_MYB 1.97900.720/ 5106 -36-31 Upstream region FORWARD
3 Myb_box5_MYB 1.97900.720/ 5106 -524-519 Upstream region FORWARD
4 Myb_box1_MYB 1.40080.823/ 5106 -627-622 Upstream region FORWARD
5 W_box_WRKY 2.17550.891/ 5106 -446-441 Upstream region REVERSE
6 G_box_bHLH 3.36952.036/ 5106 -985-980 Upstream region FORWARD
7 DREB_AP2_EREBP 2.69742.763/ 5106 -384-379 Upstream region FORWARD
8 G_box2_bZIP 2.15132.190/ 5106 -810-805 Upstream region REVERSE
9 GCC_box_AP2_EREBP 4.28046.447/ 5106 -244-239 Upstream region REVERSE
10 N_box_bHLH 2.67443.413/ 5106 -331-326 Upstream region REVERSE
11 Nac_box_NAC 2.87651.950/ 5106 -145-140 Upstream region REVERSE


Details about the Gene : AT3G25500:


TAIR IDAT3G25500
Alternate NamesAFH1, AFH1, AFH1, AFH1
Chromosome Position9251093-9255002 (chr3)
Transcription FactorsMyb_box3_MYB
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
G_box_bHLH
DREB_AP2_EREBP
G_box2_bZIP
GCC_box_AP2_EREBP
N_box_bHLH
Nac_box_NAC
Experimental Data from
Microarray Database
GEO-WOUNDING
References --


Download Sequence Data :

Click here to download AT3G25500 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012