STIFDB - 1000bp Information | TAIR Gene ID: AT3G18780


STIFdb - 1000bp TFmap : AT3G18780

AT3G18780_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G18780

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.80900.439/ 24622 -262-257 Upstream regionReverse
2 Myb_box2_MYB 2.82582.432/ 24622 -261-256 Upstream regionReverse
3 DREB_AP2_EREBP 3.37442.871/ 24622 7176 5'UTRReverse
4 N_box_bHLH 2.71868.457/ 24622 -256-251 Upstream regionForward
5 N_box_bHLH 2.71868.457/ 24622 -611-606 Upstream regionForward
6 AuxRE_ARF 2.79221.529/ 24622 4550 5'UTRForward
7 W_box_WRKY 1.47582.328/ 24622 -230-225 Upstream regionForward
8 W_box_WRKY 1.47582.328/ 24622 -879-874 Upstream regionReverse
9 HSE1_HSF 0.83140.965/ 24622 168175 5'UTRForward


Details about the Gene : AT3G18780:


TAIR IDAT3G18780
Alternate NamesACT2, ACTIN2, DEFORMED ROOT HAIRS 1, ENHANCER OF LRX1 2, LIGHT STRESS-REGULATED 2, ACTIN 2, DER1, ENL2, LSR2
Chromosome Position6473848-6475540(chr3)
Transcription FactorsHSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
DREB_AP2_EREBP
N_box_bHLH
Experimental Data from
Microarray Database
RARGE-COLD, RARGE-REHYDRATION
References --


Download Sequence Data :

Click here to download AT3G18780 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012