STIFDB - 1000bp Information | TAIR Gene ID: AT3G13300


STIFdb - 1000bp TFmap : AT3G13300

AT3G13300_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G13300

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.10760.846/ 24622 -790-785 Upstream regionReverse
2 Myb_box5_MYB 1.10760.846/ 24622 -394-389 Upstream regionReverse
3 Myb_box5_MYB 1.10760.846/ 24622 -636-631 Upstream regionForward
4 GCC_box_AP2_EREBP 4.31144.604/ 24622 9297 5'UTRReverse
5 DREB_AP2_EREBP 2.65331.845/ 24622 -924-919 Upstream regionReverse
6 Nac_box_NAC 2.67211.658/ 24622 -295-290 Upstream regionForward
7 Myb_box3_MYB 2.00911.244/ 24622 -636-631 Upstream regionForward
8 Myb_box1_MYB 1.25730.693/ 24622 -636-631 Upstream regionForward
9 HBE_HB 1.323510.992/ 24622 -168-160 Upstream regionForward
10 AuxRE_ARF 2.56351.966/ 24622 -699-694 Upstream regionReverse
11 AuxRE_ARF 2.56351.966/ 24622 -749-744 Upstream regionReverse
12 HSE1_HSF 0.62170.621/ 24622 2229 5'UTRReverse
13 W_box_WRKY 1.29751.497/ 24622 -347-342 Upstream regionReverse
14 W_box_WRKY 1.29751.497/ 24622 -355-350 Upstream regionReverse


Details about the Gene : AT3G13300:


TAIR IDAT3G13300
Alternate NamesVCS, VARICOSE
Chromosome Position4302881-4304091(chr3)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
Nac_box_NAC
DREB_AP2_EREBP
GCC_box_AP2_EREBP
HBE_HB
Experimental Data from
Microarray Database
RARGE-DROUGHT
References --


Download Sequence Data :

Click here to download AT3G13300 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012