STIFDB - 1000bp Information | TAIR Gene ID: AT3G12280


STIFdb - 1000bp TFmap : AT3G12280

AT3G12280_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G12280

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.62311.410/ 24622 -334-329 Upstream regionForward
2 Myb_box5_MYB 1.62311.410/ 24622 -948-943 Upstream regionReverse
3 Myb_box5_MYB 1.62311.410/ 24622 -136-131 Upstream regionForward
4 Myb_box5_MYB 1.62311.410/ 24622 -955-950 Upstream regionForward
5 Myb_box5_MYB 1.62311.410/ 24622 -946-941 Upstream regionForward
6 Myb_box2_MYB 2.43791.563/ 24622 -364-359 Upstream regionReverse
7 GCC_box_AP2_EREBP 3.71614.604/ 24622 -175-170 Upstream regionReverse
8 G_box2_bZIP 2.35101.806/ 24622 -466-461 Upstream regionForward
9 Myb_box1_MYB 1.71501.387/ 24622 -955-950 Upstream regionForward
10 Myb_box1_MYB 1.71501.387/ 24622 -946-941 Upstream regionForward
11 C_ABRE_bZIP 3.28138.067/ 24622 -297-292 Upstream regionForward
12 AuxRE_ARF 2.28370.983/ 24622 118123 5'UTRReverse
13 HSE1_HSF -0.32170.621/ 24622 -979-972 Upstream regionForward
14 W_box_WRKY 1.79800.748/ 24622 -751-746 Upstream regionForward


Details about the Gene : AT3G12280:


TAIR IDAT3G12280
Alternate NamesRBR1, RETINOBLASTOMA-RELATED 1, RETINOBLASTOMA PROTEIN, RB, RBL1
Chromosome Position3919141-3918441(chr3)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
GCC_box_AP2_EREBP
C_ABRE_bZIP
Experimental Data from
Microarray Database
RARGE-COLD
References --


Download Sequence Data :

Click here to download AT3G12280 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012