STIFDB - 1000bp Information | TAIR Gene ID: AT3G11940


STIFdb - 1000bp TFmap : AT3G11940

AT3G11940_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G11940

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.22191.184/ 24622 -150-145 Upstream regionForward
2 Myb_box5_MYB 2.22191.184/ 24622 -971-966 Upstream regionReverse
3 Myb_box5_MYB 2.22191.184/ 24622 -641-636 Upstream regionForward
4 Myb_box2_MYB 3.00022.189/ 24622 -970-965 Upstream regionReverse
5 G_box2_bZIP 2.31692.528/ 24622 -511-506 Upstream regionReverse
6 Nac_box_NAC 2.98352.321/ 24622 -910-905 Upstream regionForward
7 Myb_box1_MYB 2.33500.971/ 24622 -641-636 Upstream regionForward
8 Myb_box4_MYB 2.95293.680/ 24622 -54-48 Upstream regionReverse
9 AuxRE_ARF 2.87931.376/ 24622 9196 5'UTRReverse
10 HSE1_HSF 0.10690.869/ 24622 -823-816 Upstream regionReverse


Details about the Gene : AT3G11940:


TAIR IDAT3G11940
Alternate NamesATRPS5A, ARABIDOPSIS MINUTE-LIKE 1, RIBOSOMAL PROTEIN 5A
Chromosome Position3779513-3779361(chr3)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box2_MYB
AuxRE_ARF
Nac_box_NAC
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-COLD
References --


Download Sequence Data :

Click here to download AT3G11940 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012