STIFDB - 1000bp Information | TAIR Gene ID: AT2G42540


STIFdb - 1000bp TFmap : AT2G42540

AT2G42540_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT2G42540

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.32022.322/ 24622 -854-849 Upstream regionForward
2 Myb_box5_MYB 1.32022.322/ 24622 -316-311 Upstream regionReverse
3 Myb_box5_MYB 1.32022.322/ 24622 -859-854 Upstream regionReverse
4 Myb_box5_MYB 1.32022.322/ 24622 -49-44 Upstream regionReverse
5 Myb_box5_MYB 1.32022.322/ 24622 -47-42 Upstream regionForward
6 Myb_box5_MYB 1.32022.322/ 24622 -856-851 Upstream regionReverse
7 Myb_box5_MYB 1.32022.322/ 24622 -341-336 Upstream regionForward
8 Myb_box5_MYB 1.32022.322/ 24622 -39-34 Upstream regionReverse
9 Myb_box5_MYB 1.32022.322/ 24622 -354-349 Upstream regionReverse
10 Myb_box5_MYB 1.32022.322/ 24622 -857-852 Upstream regionForward
11 G_box_bHLH 3.45551.412/ 24622 -28-23 Upstream regionForward
12 DREB_AP2_EREBP 3.49411.520/ 24622 -80-75 Upstream regionForward
13 Myb_box3_MYB 2.21971.024/ 24622 -39-34 Upstream regionReverse
14 Myb_box1_MYB 1.47610.571/ 24622 -39-34 Upstream regionReverse
15 AuxRE_ARF 2.90310.810/ 24622 -883-878 Upstream regionReverse
16 N_box_bHLH 3.45942.239/ 24622 -979-974 Upstream regionForward
17 HSE1_HSF 0.93910.511/ 24622 -891-884 Upstream regionForward


Details about the Gene : AT2G42540:


TAIR IDAT2G42540
Alternate NamesCOR15A, COLD-REGULATED 15A, COR15
Chromosome Position17719409-17719009(chr2)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
AuxRE_ARF
DREB_AP2_EREBP
G_box_bHLH
N_box_bHLH
Experimental Data from
Microarray Database
DRASTIC-COLD, DRASTIC-DROUGHT, DRASTIC-NACL, RARGE-COLD, STRESSLINK-COLD-DROUGHT-SALT
References Elizabeth A. Bray, 2002. Annals of Botany 89:803-811


Download Sequence Data :

Click here to download AT2G42540 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012