STIFDB - 1000bp Information | TAIR Gene ID: AT2G42450


STIFdb - 1000bp TFmap : AT2G42450

AT2G42450_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT2G42450

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.94640.858/ 24622 -995-990 Upstream regionReverse
2 Myb_box5_MYB 1.94640.858/ 24622 -456-451 Upstream regionForward
3 Myb_box5_MYB 1.94640.858/ 24622 -734-729 Upstream regionForward
4 Myb_box5_MYB 1.94640.858/ 24622 146151 5'UTRReverse
5 Myb_box5_MYB 1.94640.858/ 24622 -780-775 Upstream regionReverse
6 Myb_box2_MYB 2.66740.952/ 24622 -994-989 Upstream regionReverse
7 GCC_box_AP2_EREBP 4.234311.210/ 24622 8590 5'UTRReverse
8 GCC_box_AP2_EREBP 4.234311.210/ 24622 1318 5'UTRForward
9 GCC_box_AP2_EREBP 4.234311.210/ 24622 1419 5'UTRReverse
10 GCC_box_AP2_EREBP 4.234311.210/ 24622 4146 5'UTRReverse
11 G_box2_bZIP 2.09251.099/ 24622 -713-708 Upstream regionForward
12 Myb_box3_MYB 2.07400.757/ 24622 -753-748 Upstream regionReverse
13 Myb_box1_MYB 1.33830.422/ 24622 -753-748 Upstream regionReverse
14 Myb_box4_MYB 2.55711.600/ 24622 -844-838 Upstream regionReverse
15 C_ABRE_bZIP 3.88659.821/ 24622 -978-973 Upstream regionForward
16 C_ABRE_bZIP 3.88659.821/ 24622 -896-891 Upstream regionForward
17 AuxRE_ARF 2.68401.795/ 24622 -187-182 Upstream regionReverse
18 AuxRE_ARF 2.68401.795/ 24622 -657-652 Upstream regionReverse
19 AuxRE_ARF 2.68401.795/ 24622 -169-164 Upstream regionReverse
20 HSE1_HSF 1.54800.755/ 24622 -396-389 Upstream regionReverse
21 HSE1_HSF 1.54800.755/ 24622 5057 5'UTRReverse
22 W_box_WRKY 2.12610.911/ 24622 -727-722 Upstream regionReverse
23 W_box_WRKY 2.12610.911/ 24622 -159-154 Upstream regionForward


Details about the Gene : AT2G42450:


TAIR IDAT2G42450
Alternate NamesNIL(putative)
Chromosome Position17682098-17681933(chr2)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
GCC_box_AP2_EREBP
Myb_box4_MYB
C_ABRE_bZIP
Experimental Data from
Microarray Database
RARGE-COLD
References --


Download Sequence Data :

Click here to download AT2G42450 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012