STIFDB - 1000bp Information | TAIR Gene ID: AT2G41100


STIFdb - 1000bp TFmap : AT2G41100

AT2G41100_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT2G41100

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.97511.316/ 24622 -700-695 Upstream regionReverse
2 Myb_box5_MYB 1.97511.316/ 24622 -176-171 Upstream regionReverse
3 Myb_box5_MYB 1.97511.316/ 24622 -868-863 Upstream regionReverse
4 Myb_box5_MYB 1.97511.316/ 24622 -174-169 Upstream regionForward
5 Myb_box5_MYB 1.97511.316/ 24622 -112-107 Upstream regionReverse
6 Myb_box5_MYB 1.97511.316/ 24622 -110-105 Upstream regionForward
7 Myb_box2_MYB 2.72373.648/ 24622 -175-170 Upstream regionReverse
8 Myb_box2_MYB 2.72373.648/ 24622 -254-249 Upstream regionReverse
9 Myb_box2_MYB 2.72373.648/ 24622 -680-675 Upstream regionReverse
10 Myb_box1_MYB 2.05370.539/ 24622 -700-695 Upstream regionReverse
11 G_box2_bZIP 2.03351.404/ 24622 -847-842 Upstream regionReverse
12 AuxRE_ARF 2.56890.765/ 24622 510 5'UTRForward
13 Nac_box_NAC 2.60782.578/ 24622 -423-418 Upstream regionForward
14 Nac_box_NAC 2.60782.578/ 24622 -840-835 Upstream regionForward
15 W_box_WRKY 2.09280.582/ 24622 -996-991 Upstream regionForward
16 HSE1_HSF 0.66511.448/ 24622 -525-518 Upstream regionForward
17 HSE1_HSF 0.66511.448/ 24622 -137-130 Upstream regionReverse
18 HSE1_HSF 0.66511.448/ 24622 -664-657 Upstream regionForward


Details about the Gene : AT2G41100:


TAIR IDAT2G41100
Alternate NamesTCH3, CALMODULIN-LIKE 5, TOUCH 3, ATCAL5
Chromosome Position17144157-17145208(chr2)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
Nac_box_NAC
Experimental Data from
Microarray Database
RARGE-COLD, RARGE-NACL
References --


Download Sequence Data :

Click here to download AT2G41100 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012