STIFDB - 1000bp Information | TAIR Gene ID: AT2G40930


STIFdb - 1000bp TFmap : AT2G40930

AT2G40930_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT2G40930

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.72350.439/ 24622 -445-440 Upstream regionForward
2 Myb_box2_MYB 2.82142.432/ 24622 -236-231 Upstream regionReverse
3 Myb_box1_MYB 2.80901.079/ 24622 -445-440 Upstream regionForward
4 AuxRE_ARF 2.73044.588/ 24622 155160 5'UTRForward
5 AuxRE_ARF 2.73044.588/ 24622 6267 5'UTRForward
6 AuxRE_ARF 2.73044.588/ 24622 -902-897 Upstream regionForward
7 Nac_box_NAC 2.73552.578/ 24622 -477-472 Upstream regionForward
8 W_box_WRKY 2.16771.164/ 24622 -333-328 Upstream regionForward
9 HSE1_HSF 1.49730.965/ 24622 191198 5'UTRForward


Details about the Gene : AT2G40930:


TAIR IDAT2G40930
Alternate NamesUBP5, PIGMENT DEFECTIVE EMBRYO 323, UBIQUITIN-SPECIFIC PROTEASE 5, ATUBP5, PDE323
Chromosome Position17089512-17089271(chr2)
Transcription FactorsMyb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
Nac_box_NAC
Experimental Data from
Microarray Database
RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT2G40930 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012