STIFDB - 1000bp Information | TAIR Gene ID: AT2G39770


STIFdb - 1000bp TFmap : AT2G39770

AT2G39770_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT2G39770

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 3.18981.076/ 24622 1520 5'UTRReverse
2 Myb_box5_MYB 3.18981.076/ 24622 5863 5'UTRForward
3 Myb_box5_MYB 3.18981.076/ 24622 -41-36 Upstream regionForward
4 Myb_box2_MYB 3.18301.990/ 24622 -414-409 Upstream regionReverse
5 Myb_box1_MYB 3.27030.883/ 24622 -41-36 Upstream regionForward
6 DREB_AP2_EREBP 3.11672.349/ 24622 8893 5'UTRReverse
7 G_box2_bZIP 3.26882.298/ 24622 5358 5'UTRForward
8 AuxRE_ARF 3.06431.251/ 24622 -256-251 Upstream regionForward
9 Nac_box_NAC 3.19592.110/ 24622 -133-128 Upstream regionForward
10 W_box_WRKY 1.74850.952/ 24622 -823-818 Upstream regionReverse
11 HSE1_HSF 1.96390.790/ 24622 2128 5'UTRForward


Details about the Gene : AT2G39770:


TAIR IDAT2G39770
Alternate NamesCYT1, EMBRYO DEFECTIVE 101, GDP-MANNOSE PYROPHOSPHORYLASE 1, SENSITIVE TO OZONE 1, VITAMIN C DEFECTIVE 1, CYTOKINESIS DEFECTIVE 1, EMB101, GMP1, SOZ1, VTC1
Chromosome Position16594780-16596478(chr2)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
Nac_box_NAC
DREB_AP2_EREBP
Experimental Data from
Microarray Database
RARGE-COLD
References --


Download Sequence Data :

Click here to download AT2G39770 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012