STIFDB - 1000bp Information | TAIR Gene ID: AT2G38170


STIFdb - 1000bp TFmap : AT2G38170

AT2G38170_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT2G38170

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.29220.718/ 24622 -759-754 Upstream regionReverse
2 Myb_box5_MYB 2.29220.718/ 24622 -185-180 Upstream regionForward
3 Myb_box2_MYB 3.12561.990/ 24622 -758-753 Upstream regionReverse
4 Myb_box1_MYB 2.44250.883/ 24622 -185-180 Upstream regionForward
5 DREB_AP2_EREBP 3.07432.349/ 24622 -710-705 Upstream regionForward
6 G_box2_bZIP 3.21952.298/ 24622 -15-10 Upstream regionForward
7 AuxRE_ARF 3.14311.251/ 24622 6368 5'UTRForward
8 Nac_box_NAC 3.14764.219/ 24622 -201-196 Upstream regionForward
9 Nac_box_NAC 3.14764.219/ 24622 -939-934 Upstream regionForward
10 W_box_WRKY 2.51220.952/ 24622 -830-825 Upstream regionReverse
11 HSE1_HSF 1.10060.790/ 24622 -83-76 Upstream regionForward


Details about the Gene : AT2G38170:


TAIR IDAT2G38170
Alternate NamesCAX1, RARE COLD INDUCIBLE4, HIGH AFFINITY CALCIUM ANTIPORTER CAX1, ATCAX1, RCI4
Chromosome Position16000357-16000257(chr2)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
Nac_box_NAC
DREB_AP2_EREBP
Experimental Data from
Microarray Database
RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT2G38170 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012