STIFDB - 1000bp Information | TAIR Gene ID: AT1G71830


STIFdb - 1000bp TFmap : AT1G71830

AT1G71830_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT1G71830

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.98281.128/ 24622 -454-449 Upstream regionForward
2 Myb_box5_MYB 1.98281.128/ 24622 -205-200 Upstream regionForward
3 Myb_box5_MYB 1.98281.128/ 24622 -47-42 Upstream regionForward
4 Myb_box5_MYB 1.98281.128/ 24622 -294-289 Upstream regionForward
5 Myb_box2_MYB 2.82971.563/ 24622 -827-822 Upstream regionReverse
6 Myb_box4_MYB 2.70162.629/ 24622 -229-223 Upstream regionReverse
7 N_box_bHLH 2.64242.718/ 24622 -151-146 Upstream regionReverse
8 AuxRE_ARF 2.71911.966/ 24622 319324 5'UTRReverse
9 AuxRE_ARF 2.71911.966/ 24622 316321 5'UTRForward
10 W_box_WRKY 2.20361.497/ 24622 -172-167 Upstream regionForward
11 W_box_WRKY 2.20361.497/ 24622 -280-275 Upstream regionForward
12 HSE1_HSF 0.83431.862/ 24622 5461 5'UTRReverse
13 HSE1_HSF 0.83431.862/ 24622 96103 5'UTRReverse
14 HSE1_HSF 0.83431.862/ 24622 -251-244 Upstream regionReverse


Details about the Gene : AT1G71830:


TAIR IDAT1G71830
Alternate NamesSERK1, SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1, ATSERK1
Chromosome Position27020820-27022236(chr1)
Transcription FactorsHSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
N_box_bHLH
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT1G71830 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012