STIFDB - 1000bp Information | TAIR Gene ID: AT1G71340


STIFdb - 1000bp TFmap : AT1G71340

AT1G71340_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT1G71340

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 2.62702.445/ 5046 747752 5`UTR FORWARD
2 AuxRE_ARF 2.62702.445/ 5046 609614 5`UTR FORWARD
3 AuxRE_ARF 2.62702.445/ 5046 -121-116 Upstream region REVERSE
4 Myb_box3_MYB 2.04121.038/ 5046 603608 5`UTR REVERSE
5 HSE1_HSF 1.44010.509/ 5046 -897-890 Upstream region REVERSE
6 Myb_box5_MYB 2.80490.220/ 5046 -749-744 Upstream region REVERSE
7 Myb_box1_MYB 1.29530.501/ 5046 603608 5`UTR REVERSE
8 W_box_WRKY 1.33091.630/ 5046 -421-416 Upstream region REVERSE
9 W_box_WRKY 1.33091.630/ 5046 -838-833 Upstream region REVERSE
10 W_box_WRKY 1.33091.630/ 5046 769774 5`UTR FORWARD
11 G_box_bHLH 3.27281.251/ 5046 729734 5`UTR FORWARD
12 DREB_AP2_EREBP 2.66841.709/ 5046 -995-990 Upstream region REVERSE
13 G_box2_bZIP 2.02425.417/ 5046 -430-425 Upstream region REVERSE
14 G_box2_bZIP 2.02425.417/ 5046 16 5`UTR REVERSE
15 G_box2_bZIP 2.02425.417/ 5046 -791-786 Upstream region FORWARD
16 G_box2_bZIP 2.02425.417/ 5046 965970 5`UTR REVERSE
17 N_box_bHLH 3.35772.092/ 5046 -920-915 Upstream region FORWARD
18 Nac_box_NAC 2.64761.198/ 5046 759764 5`UTR FORWARD


Details about the Gene : AT1G71340:


TAIR IDAT1G71340
Alternate NamesAtGDPD4, AtGDPD4
Chromosome Position26885170-26888338 (chr1)
Transcription FactorsAuxRE_ARF
Myb_box3_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
G_box_bHLH
DREB_AP2_EREBP
G_box2_bZIP
N_box_bHLH
Nac_box_NAC
Experimental Data from
Microarray Database
GEO-NACL
References --


Download Sequence Data :

Click here to download AT1G71340 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012