STIFDB - 1000bp Information | TAIR Gene ID: AT1G65840


STIFdb - 1000bp TFmap : AT1G65840

AT1G65840_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT1G65840

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 3.01691.048/ 5046 366371 5`UTR REVERSE
2 Myb_box3_MYB 2.47382.670/ 5046 -409-404 Upstream region REVERSE
3 Myb_box3_MYB 2.47382.670/ 5046 -685-680 Upstream region REVERSE
4 HSE1_HSF 1.25510.654/ 5046 327334 5`UTR FORWARD
5 Myb_box5_MYB 2.36590.848/ 5046 -301-296 Upstream region FORWARD
6 Myb_box5_MYB 2.36590.848/ 5046 96101 5`UTR FORWARD
7 Myb_box5_MYB 2.36590.848/ 5046 -953-948 Upstream region REVERSE
8 Myb_box1_MYB 2.50941.290/ 5046 -301-296 Upstream region FORWARD
9 Myb_box1_MYB 2.50941.290/ 5046 96101 5`UTR FORWARD
10 W_box_WRKY 2.50741.397/ 5046 -930-925 Upstream region FORWARD
11 W_box_WRKY 2.50741.397/ 5046 -154-149 Upstream region FORWARD
12 G_box2_bZIP 2.51391.741/ 5046 -873-868 Upstream region FORWARD
13 GCC_box_AP2_EREBP 4.68345.149/ 5046 143148 5`UTR REVERSE
14 Myb_box4_MYB 3.02663.029/ 5046 511 5`UTR REVERSE


Details about the Gene : AT1G65840:


TAIR IDAT1G65840
Alternate NamesATPAO4, ATPAO4
Chromosome Position24489780-24493024 (chr1)
Transcription FactorsAuxRE_ARF
Myb_box3_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
G_box2_bZIP
GCC_box_AP2_EREBP
Myb_box4_MYB
Experimental Data from
Microarray Database
GEO-IRON
References --


Download Sequence Data :

Click here to download AT1G65840 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012