STIFDB - 1000bp Information | TAIR Gene ID: AT1G55850


STIFdb - 1000bp TFmap : AT1G55850

AT1G55850_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT1G55850

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 2.76422.257/ 5046 -111-106 Upstream region FORWARD
2 AuxRE_ARF 2.76422.257/ 5046 -632-627 Upstream region FORWARD
3 HSE1_HSF 0.69552.113/ 5046 -996-989 Upstream region FORWARD
4 HSE1_HSF 0.69552.113/ 5046 -713-706 Upstream region FORWARD
5 HSE1_HSF 0.69552.113/ 5046 -850-843 Upstream region REVERSE
6 Myb_box5_MYB 2.91850.304/ 5046 -746-741 Upstream region REVERSE
7 Myb_box1_MYB 3.00390.694/ 5046 -746-741 Upstream region REVERSE
8 W_box_WRKY 1.40400.752/ 5046 -168-163 Upstream region FORWARD
9 Myb_box2_MYB 2.89091.659/ 5046 -259-254 Upstream region REVERSE
10 G_box_bHLH 3.52681.733/ 5046 -802-797 Upstream region REVERSE
11 G_box2_bZIP 2.20871.875/ 5046 -124-119 Upstream region FORWARD
12 GCC_box_AP2_EREBP 4.64675.545/ 5046 -67-62 Upstream region FORWARD
13 G_box1_bZIP 4.350816.876/ 5046 -803-796 Upstream region REVERSE


Details about the Gene : AT1G55850:


TAIR IDAT1G55850
Alternate NamesATCSLE1, ATCSLE1
Chromosome Position20876699-20879482 (chr1)
Transcription FactorsAuxRE_ARF
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
Myb_box2_MYB
G_box_bHLH
G_box2_bZIP
GCC_box_AP2_EREBP
G_box1_bZIP
Experimental Data from
Microarray Database
GEO-DROUGHT, GEO-IRON
References --


Download Sequence Data :

Click here to download AT1G55850 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012