STIFDB - 1000bp Information | TAIR Gene ID: AT1G53500


STIFdb - 1000bp TFmap : AT1G53500

AT1G53500_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT1G53500

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.26940.526/ 24622 -681-676 Upstream regionReverse
2 Myb_box5_MYB 2.26940.526/ 24622 -819-814 Upstream regionReverse
3 Myb_box1_MYB 1.58012.589/ 24622 -181-176 Upstream regionReverse
4 Myb_box1_MYB 1.58012.589/ 24622 9196 5'UTRForward
5 Myb_box1_MYB 1.58012.589/ 24622 6671 5'UTRReverse
6 Myb_box1_MYB 1.58012.589/ 24622 -723-718 Upstream regionReverse
7 G_box2_bZIP 3.05161.685/ 24622 -603-598 Upstream regionForward
8 AuxRE_ARF 2.81920.918/ 24622 95100 5'UTRForward
9 Nac_box_NAC 2.99381.547/ 24622 -474-469 Upstream regionReverse
10 W_box_WRKY 2.35020.698/ 24622 -658-653 Upstream regionForward
11 HSE1_HSF 1.03670.579/ 24622 227234 5'UTRForward
12 Myb_box3_MYB 2.28954.643/ 24622 -181-176 Upstream regionReverse
13 Myb_box3_MYB 2.28954.643/ 24622 9196 5'UTRForward
14 Myb_box3_MYB 2.28954.643/ 24622 6671 5'UTRReverse
15 Myb_box3_MYB 2.28954.643/ 24622 -723-718 Upstream regionReverse


Details about the Gene : AT1G53500:


TAIR IDAT1G53500
Alternate NamesMUM4, RHAMNOSE BIOSYNTHESIS 2, MUCILAGE-MODIFIED 4, RHM2
Chromosome Position19973426-19972908(chr1)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
Nac_box_NAC
Experimental Data from
Microarray Database
RARGE-ABA, RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT1G53500 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012