STIFDB - 1000bp Information | TAIR Gene ID: AT1G50630


STIFdb - 1000bp TFmap : AT1G50630

AT1G50630_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT1G50630

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box3_MYB 2.23561.557/ 5046 -186-181 Upstream region FORWARD
2 Myb_box5_MYB 2.92690.330/ 5046 -507-502 Upstream region FORWARD
3 Myb_box1_MYB 3.01680.752/ 5046 -507-502 Upstream region FORWARD
4 W_box_WRKY 2.28510.815/ 5046 -127-122 Upstream region FORWARD
5 Myb_box2_MYB 2.85231.797/ 5046 -277-272 Upstream region REVERSE
6 C_ABRE_bZIP 4.09098.410/ 5046 -522-517 Upstream region FORWARD
7 G_box2_bZIP 3.00042.031/ 5046 1823 5`UTR REVERSE
8 GCC_box_AP2_EREBP 4.45966.007/ 5046 -639-634 Upstream region REVERSE
9 N_box_bHLH 3.54773.138/ 5046 -527-522 Upstream region REVERSE
10 Nac_box_NAC 2.96911.797/ 5046 -889-884 Upstream region FORWARD
11 Myb_box4_MYB 2.74313.534/ 5046 -273-267 Upstream region REVERSE
12 HBE_HB 1.596610.782/ 5046 -375-367 Upstream region REVERSE


Details about the Gene : AT1G50630:


TAIR IDAT1G50630
Alternate NamesNIL(putative)
Chromosome Position18751456-18753669 (chr1)
Transcription FactorsMyb_box3_MYB
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
Myb_box2_MYB
C_ABRE_bZIP
G_box2_bZIP
GCC_box_AP2_EREBP
N_box_bHLH
Nac_box_NAC
Myb_box4_MYB
HBE_HB
Experimental Data from
Microarray Database
GEO-ABA, GEO-DROUGHT, GEO-HEAT, GEO-OSMOTIC
References --


Download Sequence Data :

Click here to download AT1G50630 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012