STIFDB - 1000bp Information | TAIR Gene ID: AT1G50560


STIFdb - 1000bp TFmap : AT1G50560

AT1G50560_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT1G50560

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 2.74231.128/ 5046 -84-79 Upstream region FORWARD
2 Myb_box5_MYB 2.05020.609/ 5046 6166 5`UTR REVERSE
3 Myb_box5_MYB 2.05020.609/ 5046 -665-660 Upstream region REVERSE
4 W_box_WRKY 1.42302.257/ 5046 -455-450 Upstream region REVERSE
5 W_box_WRKY 1.42302.257/ 5046 -90-85 Upstream region FORWARD
6 W_box_WRKY 1.42302.257/ 5046 -895-890 Upstream region FORWARD
7 DREB_AP2_EREBP 3.42292.367/ 5046 -690-685 Upstream region REVERSE
8 G_box2_bZIP 2.14433.750/ 5046 -442-437 Upstream region REVERSE
9 G_box2_bZIP 2.14433.750/ 5046 5055 5`UTR REVERSE
10 GCC_box_AP2_EREBP 4.353211.090/ 5046 -688-683 Upstream region FORWARD
11 GCC_box_AP2_EREBP 4.353211.090/ 5046 -687-682 Upstream region REVERSE
12 Nac_box_NAC 2.81093.318/ 5046 -100-95 Upstream region FORWARD
13 Nac_box_NAC 2.81093.318/ 5046 -227-222 Upstream region FORWARD


Details about the Gene : AT1G50560:


TAIR IDAT1G50560
Alternate NamesCYP705A25
Chromosome Position18724207-18726272 (chr1)
Transcription FactorsAuxRE_ARF
Myb_box5_MYB
W_box_WRKY
DREB_AP2_EREBP
G_box2_bZIP
GCC_box_AP2_EREBP
Nac_box_NAC
Experimental Data from
Microarray Database
GEO-IRON
References --


Download Sequence Data :

Click here to download AT1G50560 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012