STIFDB - 1000bp Information | TAIR Gene ID: AT1G50260


STIFdb - 1000bp TFmap : AT1G50260

AT1G50260_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT1G50260

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 HSE1_HSF 0.40760.763/ 5046 -990-983 Upstream region REVERSE
2 Myb_box5_MYB 2.46530.330/ 5046 -975-970 Upstream region FORWARD
3 Myb_box1_MYB 2.54300.752/ 5046 -975-970 Upstream region FORWARD
4 W_box_WRKY 1.93190.815/ 5046 -289-284 Upstream region REVERSE
5 Myb_box2_MYB 2.53961.797/ 5046 -756-751 Upstream region REVERSE
6 G_box_bHLH 3.04861.877/ 5046 -134-129 Upstream region FORWARD
7 DREB_AP2_EREBP 2.34765.128/ 5046 -250-245 Upstream region FORWARD
8 DREB_AP2_EREBP 2.34765.128/ 5046 -612-607 Upstream region FORWARD
9 G_box2_bZIP 2.54342.031/ 5046 -654-649 Upstream region FORWARD
10 GCC_box_AP2_EREBP 3.99216.007/ 5046 -592-587 Upstream region REVERSE
11 Nac_box_NAC 2.49681.797/ 5046 -356-351 Upstream region FORWARD
12 HBE_HB 1.802910.782/ 5046 -882-874 Upstream region FORWARD


Details about the Gene : AT1G50260:


TAIR IDAT1G50260
Alternate NamesNTMC2T5.1, NTMC2T5.1
Chromosome Position18617593-18621739 (chr1)
Transcription FactorsHSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
Myb_box2_MYB
G_box_bHLH
DREB_AP2_EREBP
G_box2_bZIP
GCC_box_AP2_EREBP
Nac_box_NAC
HBE_HB
Experimental Data from
Microarray Database
GEO-IRON
References --


Download Sequence Data :

Click here to download AT1G50260 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012