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STIFDB - 1000bp Information | TAIR Gene ID: AT1G15820

STIFdb - 1000bp TFmap : AT1G15820

AT1G15820_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT1G15820

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.99800.789/ 24622 -445-440 Upstream regionForward
2 Myb_box5_MYB 1.99800.789/ 24622 -447-442 Upstream regionReverse
3 Myb_box5_MYB 1.99800.789/ 24622 -346-341 Upstream regionForward
4 Myb_box5_MYB 1.99800.789/ 24622 -934-929 Upstream regionForward
5 G_box_bHLH 2.52821.200/ 24622 -145-140 Upstream regionForward
6 Myb_box2_MYB 1.88541.094/ 24622 -408-403 Upstream regionReverse
7 GCC_box_AP2_EREBP 3.138416.114/ 24622 -613-608 Upstream regionReverse
8 GCC_box_AP2_EREBP 3.138416.114/ 24622 -580-575 Upstream regionReverse
9 GCC_box_AP2_EREBP 3.138416.114/ 24622 -442-437 Upstream regionReverse
10 GCC_box_AP2_EREBP 3.138416.114/ 24622 -470-465 Upstream regionForward
11 GCC_box_AP2_EREBP 3.138416.114/ 24622 -800-795 Upstream regionForward
12 DREB_AP2_EREBP 1.89253.875/ 24622 -205-200 Upstream regionReverse
13 DREB_AP2_EREBP 1.89253.875/ 24622 -542-537 Upstream regionForward
14 DREB_AP2_EREBP 1.89253.875/ 24622 -560-555 Upstream regionForward
15 G_box2_bZIP 1.49661.264/ 24622 -435-430 Upstream regionForward
16 Myb_box1_MYB 2.13960.485/ 24622 -447-442 Upstream regionReverse
17 Myb_box4_MYB 1.85151.840/ 24622 -370-364 Upstream regionReverse
18 N_box_bHLH 1.91431.903/ 24622 1116 5'UTRForward
19 HSE1_HSF 0.23210.434/ 24622 -840-833 Upstream regionReverse
20 W_box_WRKY 1.50430.524/ 24622 -897-892 Upstream regionForward

Details about the Gene : AT1G15820:


TAIR IDAT1G15820
Alternate NamesLHCB6, CP24
Chromosome Position5447855-5447672(chr1)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
DREB_AP2_EREBP
G_box_bHLH
N_box_bHLH
GCC_box_AP2_EREBP
Myb_box4_MYB
Experimental Data from
Microarray Database 		DRASTIC-COLD, DRASTIC-DROUGHT, DRASTIC-NACL
References --

Download Sequence Data :

Click here to download AT1G15820 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012