STIFDB - Entry Name : AT5G54470

Stress Signals involved in

 COLD  DROUGHT  UV-B 

STIFDB Provides Data in 2 levels:



Gene Description : AT5G54470

Locus IdentifierGene Model NameGene Model DescriptionGene Model Type
AT5G54470AT5G54470.1zinc finger (B-box type) family protein similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT4G27310.1) similar to Os06g0298200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057441.1) similar to hypothetical protein [Cleome spinosa] (GB:ABD96940.1) contains InterPro domain Zinc finger, CONSTANS-type (InterPro:IPR002926) contains InterPro domain Zinc finger, B-box (InterPro:IPR000315)


Gene Ontology Data from TAIR : AT5G54470

GO Category GO Annotation Type GO ID GO Evidence Type References
Molecular Functionzinc ion bindingGO:0008270 ISSCommunication:501714663
Biological Processregulation of transcription, DNA-dependentGO:0006355 ISSPublication:1345963|PMID:11118137
Biological Processregulation of transcription, DNA-dependentGO:0006355 TASPublication:1345963|PMID:11118137
Molecular Functionsequence-specific DNA binding transcription factor activityGO:0003700 ISSPublication:1345963|PMID:11118137
Cellular CompartmentintracellularGO:0005622 IEAAnalysisReference:501739686
Biological Processresponse to coldGO:0009409 IEPPublication:501733608|PMID:19566593
    Biological Process     Molecular Function     Cellular Compartment

Click here for Guide to GO Evidence Codes



Orthologs

Gene IdSorghum bicolorZea maysGlycine Max
AT5G54470Sb07g004973GRMZM2G081577--

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012