STIFDB - Entry Name : AT5G51940

Stress Signals involved in

 NACL 

STIFDB Provides Data in 2 levels:



Gene Description : AT5G51940

Locus IdentifierGene Model NameGene Model DescriptionGene Model Type
AT5G51940AT5G51940.1DNA-directed RNA polymerase II, putative similar to DNA-directed RNA polymerase II, putative [Arabidopsis thaliana] (TAIR:AT2G04630.1) similar to Os07g0463100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059582.1) similar to Os03g0586600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050570.1) similar to DNA-directed RNA polymerase IIa [Nicotiana tabacum] (GB:AAD34613.1) contains InterPro domain DNA-directed RNA polymerase, 14 to 18 kDa subunit (InterPro:IPR006111) contains InterPro domain RNA polymerase subunit, RPB5/RPB6-like (InterPro:IPR009026) contains InterPro domain RNA polymerase subunit, RPB6/omega (InterPro:IPR012293) contains InterPro domain RNA polymerase Rpb6 (InterPro:IPR006110)


Gene Ontology Data from TAIR : AT5G51940

GO Category GO Annotation Type GO ID GO Evidence Type References
Molecular FunctionDNA-directed RNA polymerase activityGO:0003899 ISSCommunication:501714663
Molecular FunctionDNA bindingGO:0003677 ISSCommunication:501714663
Biological Processtranscription, DNA-dependentGO:0006351 ISSCommunication:501714663
Cellular CompartmentRNA polymerase complexGO:0030880 IEAAnalysisReference:501724250
    Biological Process     Molecular Function     Cellular Compartment

Click here for Guide to GO Evidence Codes



Orthologs

Gene IdSorghum bicolorZea maysGlycine Max
AT5G51940Sb02g011150GRMZM2G086904GLYMA20G29520

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012