STIFDB - Entry Name : AT4G16780

Stress Signals involved in

 COLD 

STIFDB Provides Data in 2 levels:



Gene Description : AT4G16780

Locus IdentifierGene Model NameGene Model DescriptionGene Model Type
AT4G16780AT4G16780.1ATHB-2 (Homeobox-leucine zipper protein HAT4) DNA binding / transcription factor Identical to Homeobox-leucine zipper protein HAT4 (Homeodomain-leucine zipper protein HAT4) (HD-ZIP protein 4) (Homeodomain transcription factor ATHB-2) (HD-ZIP protein ATHB-2) (HAT4) [Arabidopsis Thaliana] (GB:Q05466) similar to HAT2, transcription factor [Arabidopsis thaliana] (TAIR:AT5G47370.1) similar to hypothetical protein [Capsella rubella] (GB:CAB96199.1) contains InterPro domain Homeodomain-related (InterPro:IPR012287) contains InterPro domain Homeobox (InterPro:IPR001356) contains InterPro domain Leucine zipper, homeobox-associated (InterPro:IPR003106) contains InterPro domain Homeodomain-like (InterPro:IPR009057) contains InterPro domain Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047) contains InterPro domain HD-ZIP protein, N-terminal (InterPro:IPR006712)


Gene Ontology Data from TAIR : AT4G16780

GO Category GO Annotation Type GO ID GO Evidence Type References
Molecular Functiontranscription factor activityGO:0003700 ISSPublication:1345963|PMID:11118137
Biological Processunidimensional cell growthGO:0009826 IMPPublication:1211|PMID:10477292
Biological Processshoot morphogenesisGO:0010016 IMPPublication:5233|PMID:8449400
Molecular FunctionDNA bindingGO:0003677 ISSCommunication:501714663
Biological Processresponse to auxin stimulusGO:0009733 IMPPublication:1211|PMID:10477292
Biological Processnegative regulation of transcriptionGO:0016481 IDAPublication:1211|PMID:10477292
Molecular Functionprotein homodimerization activityGO:0042803 IDAPublication:5116|PMID:8253077
Biological Processshade avoidanceGO:0009641 IEPPublication:501718653|PMID:16565297
Biological Processregulation of transcription, DNA-dependentGO:0006355 ISSCommunication:501714663
Biological Processcell proliferationGO:0008283 IMPPublication:1211|PMID:10477292
Biological Processred or far red light signaling pathwayGO:0010017 IEPPublication:501723260|PMID:17965713
Cellular CompartmentnucleusGO:0005634 IDAPublication:501714452|PMID:15610358
Molecular Functionsequence-specific DNA bindingGO:0043565 IDAPublication:5116|PMID:8253077
Biological Processresponse to cytokinin stimulusGO:0009735 IEPPublication:501717764|PMID:16212609
Cellular CompartmentnucleusGO:0005634 ISSCommunication:501714663
Biological Processroot developmentGO:0048364 IMPPublication:1211|PMID:10477292
Biological Processresponse to far red lightGO:0010218 IEPPublication:5118|PMID:8106086
    Biological Process     Molecular Function     Cellular Compartment

Click here for Guide to GO Evidence Codes



Orthologs

Gene IdSorghum bicolorZea maysGlycine Max
AT4G16780Sb01g029000GRMZM2G148074GLYMA11G03850

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012