STIFDB - Entry Name : AT4G13780

Stress Signals involved in

 COLD 

STIFDB Provides Data in 2 levels:



Gene Description : AT4G13780

Locus IdentifierGene Model NameGene Model DescriptionGene Model Type
AT4G13780AT4G13780.1methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative Identical to Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) [Arabidopsis Thaliana] (GB:Q9SVN5) similar to tRNA-binding region domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G40660.1) similar to methionyl-tRNA synthetase [Oryza sativa] (GB:AAC99620.1) similar to Aminoacyl-tRNA synthetase, class Ia Nucleic acid-binding, OB-fold, subgroup [Medicago truncatula] (GB:ABE91897.1) similar to Probable methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) (GB:Q9ZTS1) contains InterPro domain Methionyl-tRNA synthetase, dimer-forming (InterPro:IPR008224) contains InterPro domain Nucleic acid-binding, OB-fold, subgroup (InterPro:IPR012340) contains InterPro domain Aminoacyl-tRNA synthetase, class I (InterPro:IPR001412) contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR008994) contains InterPro domain t-RNA-binding region (InterPro:IPR002547) contains InterPro domain Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080) contains InterPro domain Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304)


Gene Ontology Data from TAIR : AT4G13780

GO Category GO Annotation Type GO ID GO Evidence Type References
Cellular CompartmentcytosolGO:0005829 TASPublication:501718049|PMID:16297076
Biological Processmethionyl-tRNA aminoacylationGO:0006431 ISSCommunication:501714663
Molecular Functionmethionine-tRNA ligase activityGO:0004825 ISSCommunication:501714663
    Biological Process     Molecular Function     Cellular Compartment

Click here for Guide to GO Evidence Codes



Orthologs

Gene IdSorghum bicolorZea maysGlycine Max
AT4G13780Sb01g042830GRMZM2G099628GLYMA12G02080

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012