STIFDB - Entry Name : AT1G55310

Stress Signals involved in

 NACL 

STIFDB Provides Data in 2 levels:



Gene Description : AT1G55310

Locus IdentifierGene Model NameGene Model DescriptionGene Model Type
AT1G55310AT1G55310.1Encodes a SR spliceosome protein that is localized to nuclear specks, interacts with SR45 and the U1-70K protein of the U1 snRNP, has sequence similar to human SC35 protein.


Gene Ontology Data from TAIR : AT1G55310

GO Category GO Annotation Type GO ID GO Evidence Type References
Cellular Compartmentnuclear speckGO:0016607 IDAPublication:501712496|PMID:15133128
Molecular FunctionRNA bindingGO:0003723 ISSCommunication:501714663
Molecular FunctionRNA bindingGO:0003723 ISSPublication:922|PMID:10593939
Cellular Compartmentinterchromatin granuleGO:0035061 IDAPublication:501712054|PMID:15034145
Biological ProcessRNA splicingGO:0008380 NASPublication:501719314|PMID:16807317
Biological Processnuclear mRNA splicing, via spliceosomeGO:0000398 IPIPublication:922|PMID:10593939
Molecular FunctionRNA bindingGO:0003723 ISSCommunication:501714663
Molecular Functionprotein bindingGO:0005515 IPIPublication:922|PMID:10593939
Biological ProcessRNA splicingGO:0008380 NASPublication:501719314|PMID:16807317
    Biological Process     Molecular Function     Cellular Compartment

Click here for Guide to GO Evidence Codes



Orthologs

Gene IdSorghum bicolorZea maysGlycine Max
AT1G55310Sb02g040350GRMZM5G867185--

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012