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STIFDB - Entry Name : AT1G50410

Stress Signals involved in

 ABA 

STIFDB Provides Data in 2 levels:
1000bp Data
100bp Data

Gene Description : AT1G50410

Locus IdentifierGene Model NameGene Model DescriptionGene Model Type
AT1G50410AT1G50410.1SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein similar to EDA16 (embryo sac development arrest 16), ATP binding / DNA binding / helicase/ protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G61140.1) similar to SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT1G11100.1) similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G20010.1) similar to putative ATPase [Oryza sativa (japonica cultivar-group)] (GB:BAD52846.1) similar to H0323C08.5 [Oryza sativa (indica cultivar-group)] (GB:CAH68165.1) similar to Os08g0180300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061138.1) contains InterPro domain DEAD/DEAH box helicase, N-terminal (InterPro:IPR011545) contains InterPro domain SNF2-related (InterPro:IPR000330) contains InterPro domain Helicase, C-terminal (InterPro:IPR001650) contains InterPro domain Zinc finger, RING-type (InterPro:IPR001841)

Gene Ontology Data from TAIR : AT1G50410

GO Category GO Annotation Type GO ID GO Evidence Type References
Molecular FunctionATP bindingGO:0005524 ISSCommunication:501714663
Molecular Functionprotein bindingGO:0005515 ISSCommunication:501714663
Molecular Functionhelicase activityGO:0004386 ISSCommunication:501714663
Molecular Functionzinc ion bindingGO:0008270 ISSCommunication:501714663
Molecular FunctionDNA bindingGO:0003677 ISSCommunication:501714663
    Biological Process     Molecular Function     Cellular Compartment

Click here for Guide to GO Evidence Codes


Orthologs

Gene IdSorghum bicolorZea maysGlycine Max
AT1G50410Sb07g005035GRMZM2G449355GLYMA20G23390
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012