STIFDB - Entry Name : AT1G05520

Stress Signals involved in

 NACL 

STIFDB Provides Data in 2 levels:



Gene Description : AT1G05520

Locus IdentifierGene Model NameGene Model DescriptionGene Model Type
AT1G05520AT1G05520.1transport protein, putative similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT4G14160.2) similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT2G21630.1) similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT3G23660.1) similar to At1g05520/T25N20_16 [Oryza sativa (japonica cultivar-group)] (GB:AAX96396.1) similar to Vesicle coat complex COPII, subunit SEC23 (ISS) [Ostreococcus tauri] (GB:CAL55059.1) similar to hypothetical protein UM01624.1 [Ustilago maydis 521] (GB:XP_757771.1) contains InterPro domain Sec23/Sec24 beta-sandwich (InterPro:IPR012990) contains InterPro domain Zinc finger, Sec23/Sec24-type (InterPro:IPR006895) contains InterPro domain Sec23/Sec24 trunk region (InterPro:IPR006896) contains InterPro domain Gelsolin region (InterPro:IPR007123) contains InterPro domain Sec23/Sec24 helical region (InterPro:IPR006900)


Gene Ontology Data from TAIR : AT1G05520

GO Category GO Annotation Type GO ID GO Evidence Type References
Cellular CompartmentCOPII vesicle coatGO:0030127 IEAAnalysisReference:501724250
Molecular Functiontransporter activityGO:0005215 ISSCommunication:501714663
Biological ProcesstransportGO:0006810 ISSCommunication:501714663
    Biological Process     Molecular Function     Cellular Compartment

Click here for Guide to GO Evidence Codes



Orthologs

Gene IdSorghum bicolorZea maysGlycine Max
AT1G05520Sb0010s021250GRMZM2G056695GLYMA18G00670

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012