SMotif

SMotif is a server to identify set of structural motifs from protein structures. Such motifs among structurally aligned multiple members of protein superfamilies are recognized by the conservation of amino acid preference and solvent inaccessibility and are examined for the conservation of other features like secondary structural content, hydrogen bonding and residue packing.


Input 1: Paste Alignment (PIR/FASTA format)   ( Insert example )

Input 2: Paste sequence of your structure(s) in pir/fasta format

Insert multipe sequence  |  Insert single sequence

Input 4: Enter PDB code, chain identifier and residue number   ( Insert example )

PDB code		Chain		Start residue no		End residue no

Contact:

Dr. R. Sowdhamini (mini@ncbs.res.in)

Dr. Saikat Chakrabarti

Dr. PN. Suganthan

G. Pugalenthi