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Garcinone B

PubChem CID: 5495928

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Compound Synonyms garcinone B, 76996-28-6, 5,9,11-trihydroxy-3,3-dimethyl-10-(3-methylbut-2-enyl)pyrano[3,2-a]xanthen-12-one, 5,9,11-Trihydroxy-3,3-dimethyl-10-(3-methyl-2-butenyl)pyrano[3,2-a]xanthen-12(3H)-one, 9CI, 6,8,12-trihydroxy-2,2-dimethyl-7-(3-methylbut-2-en-1-yl)-2,5-dihydro-1,10-dioxatetraphen-5-one, 5,9,11-trihydroxy-3,3-dimethyl-10-(3-methylbut-2-enyl)pyrano(3,2-a)xanthen-12-one, 5,9,11-Trihydroxy-3,3-dimethyl-10-(3-methyl-2-butenyl)pyrano(3,2-a)xanthen-12(3H)-one, 9ci, CHEMBL560332, SCHEMBL17056912, CHEBI:171874, DTXSID801318177, DA-53510, HY-149373, CS-0881800, 5,9,11-Trihydroxy-3,3-dimethyl-10-(3-methylbut-2-en-1-yl)pyrano[3,2-a]xanthen-12(3H)-one, Pyrano[3,2-a]xanthen-12(3H)-one, 5,9,11-trihydroxy-3,3-dimethyl-10-(3-methyl-2-butenyl)-
Ghose Rule True
Classyfire Kingdom Organic compounds
Topological Polar Surface Area 96.2
Hydrogen Bond Donor Count 3.0
Pfizer 3 75 Rule False
Scaffold Graph Level CC1C2CCCCC2CC2CCC3CCCCC3C21
Np Classifier Class Plant xanthones
Deep Smiles CC=CCccO)cccc6O))c=O)cco6)cccc6C=CCO6)C)C))))))O)))))))))))))C
Heavy Atom Count 29.0
Classyfire Class Benzopyrans
Description Constituent of Garcinia mangostana (mangosteen). Garcinone B is found in fruits and purple mangosteen.
Scaffold Graph Node Level OC1C2CCCCC2OC2CCC3OCCCC3C21
Classyfire Subclass 1-benzopyrans
Isotope Atom Count 0.0
Molecular Complexity 708.0
Database Name cmaup_ingredients;fooddb_chem_all;hmdb_chem_all;imppat_phytochem;npass_chem_all;pubchem
Defined Atom Stereocenter Count 0.0
Iupac Name 5,9,11-trihydroxy-3,3-dimethyl-10-(3-methylbut-2-enyl)pyrano[3,2-a]xanthen-12-one
Prediction Hob 1.0
Class Benzopyrans
Veber Rule True
Classyfire Superclass Organoheterocyclic compounds
Xlogp 5.3
Superclass Organoheterocyclic compounds
Subclass 1-benzopyrans
Gsk 4 400 Rule False
Molecular Formula C23H22O6
Scaffold Graph Node Bond Level O=c1c2ccccc2oc2ccc3c(c12)C=CCO3
Prediction Swissadme 0.0
Inchi Key HVXHJNVYRXRHNX-UHFFFAOYSA-N
Silicos It Class Moderately soluble
Fcsp3 0.2608695652173913
Logs -2.778
Rotatable Bond Count 2.0
State Solid
Logd 3.357
Synonyms 5,9,11-Trihydroxy-3,3-dimethyl-10-(3-methyl-2-butenyl)pyrano[3,2-a]xanthen-12(3H)-one, 9CI, 5,9,11-Trihydroxy-3,3-dimethyl-10-(3-methyl-2-butenyl)pyrano[3,2-a]xanthen-12(3H)-one, 9ci, Garcinone b, garcinone b
Substituent Name 2-prenylated xanthone, Pyranoxanthone, 2,2-dimethyl-1-benzopyran, Chromone, Resorcinol, Pyranone, Alkyl aryl ether, Benzenoid, Pyran, Heteroaromatic compound, Vinylogous acid, Polyol, Oxacycle, Ether, Hydrocarbon derivative, Organooxygen compound, Aromatic heteropolycyclic compound
Esol Class Moderately soluble
Functional Groups CC=C(C)C, c=O, cC=CC, cO, cOC, coc
Compound Name Garcinone B
Kingdom Organic compounds
Prediction Hob Swissadme 0.0
Exact Mass 394.142
Formal Charge 0.0
Monoisotopic Mass 394.142
Hydrogen Bond Acceptor Count 6.0
Molecular Weight 394.4
Gi Absorption True
Covalent Unit Count 1.0
Total Atom Stereocenter Count 0.0
Total Bond Stereocenter Count 0.0
Molecular Framework Aromatic heteropolycyclic compounds
Lipinski Rule Of 5 True
Esol -6.189863979310346
Inchi InChI=1S/C23H22O6/c1-11(2)5-6-12-14(24)9-17-19(20(12)26)21(27)18-13-7-8-23(3,4)29-22(13)15(25)10-16(18)28-17/h5,7-10,24-26H,6H2,1-4H3
Smiles CC(=CCC1=C(C2=C(C=C1O)OC3=C(C2=O)C4=C(C(=C3)O)OC(C=C4)(C)C)O)C
Nring 4.0
Np Classifier Biosynthetic Pathway Shikimates and Phenylpropanoids
Defined Bond Stereocenter Count 0.0
Egan Rule True
Taxonomy Direct Parent 2-prenylated xanthones
Np Classifier Superclass Xanthones

  • 1. Outgoing r'ship FOUND_IN to/from Aster Bellidiastrum (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 2. Outgoing r'ship FOUND_IN to/from Cratoxylum Cochinchinense (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 3. Outgoing r'ship FOUND_IN to/from Dolomiaea Souliei (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 4. Outgoing r'ship FOUND_IN to/from Eucalyptus Camaldulensis (Plant) Rel Props:Source_db:npass_chem_all
  • 5. Outgoing r'ship FOUND_IN to/from Garcinia Dulcis (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 6. Outgoing r'ship FOUND_IN to/from Garcinia Mangostana (Plant) Rel Props:Source_db:cmaup_ingredients;fooddb_chem_all;npass_chem_all
  • 7. Outgoing r'ship FOUND_IN to/from Garcinia Morella (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 8. Outgoing r'ship FOUND_IN to/from Halimodendron Halodendron (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 9. Outgoing r'ship FOUND_IN to/from Lonicera Hypoleuca (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 10. Outgoing r'ship FOUND_IN to/from Nicotiana Sylvestris (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 11. Outgoing r'ship FOUND_IN to/from Senecio Vellereus (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 12. Outgoing r'ship FOUND_IN to/from Serpocaulon Triseriale (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 13. Outgoing r'ship FOUND_IN to/from Wibelia Divaricata (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all