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Palmidin A

PubChem CID: 5320384

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Compound Synonyms Palmidin A, 17062-55-4, UNII-RF802M0XYX, RF802M0XYX, (9,9'-Bianthracene)-10,10'(9H,9'H)-dione, 2,4,4',5,5'-pentahydroxy-2'-(hydroxymethyl)-7-methyl-, [9,9'-Bianthracene]-10,10'(9H,9'H)-dione, 2,4,4',5,5'-pentahydroxy-2'-(hydroxymethyl)-7-methyl-, Aloeemodin-emodin bianthrone, CHEBI:177506, DTXSID101318495, 10-[4,5-dihydroxy-2-(hydroxymethyl)-10-oxo-9H-anthracen-9-yl]-1,3,8-trihydroxy-6-methyl-10H-anthracen-9-one, Q27288091
Ghose Rule False
Classyfire Kingdom Organic compounds
Topological Polar Surface Area 156.0
Hydrogen Bond Donor Count 6.0
Pfizer 3 75 Rule False
Scaffold Graph Level CC1C2CCCCC2C(C2C3CCCCC3C(C)C3CCCCC32)C2CCCCC12
Np Classifier Class Anthraquinones and anthrones
Deep Smiles OCcccO)ccc6)CccC6=O))cO)ccc6))))))CcccC)ccc6C=O)cc%10ccO)cc6O)))))))))O
Heavy Atom Count 38.0
Classyfire Class Anthracenes
Description From roots of Rheum palmatum (Turkey rhubarb) and from cascara. Palmidin A is found in green vegetables.
Scaffold Graph Node Level OC1C2CCCCC2C(C2C3CCCCC3C(O)C3CCCCC32)C2CCCCC12
Isotope Atom Count 0.0
Molecular Complexity 924.0
Database Name cmaup_ingredients;fooddb_chem_all;hmdb_chem_all;imppat_phytochem;npass_chem_all;pubchem
Defined Atom Stereocenter Count 0.0
Iupac Name 10-[4,5-dihydroxy-2-(hydroxymethyl)-10-oxo-9H-anthracen-9-yl]-1,3,8-trihydroxy-6-methyl-10H-anthracen-9-one
Prediction Hob 0.0
Class Anthracenes
Veber Rule False
Classyfire Superclass Benzenoids
Xlogp 4.9
Superclass Benzenoids
Gsk 4 400 Rule False
Molecular Formula C30H22O8
Scaffold Graph Node Bond Level O=C1c2ccccc2C(C2c3ccccc3C(=O)c3ccccc32)c2ccccc21
Prediction Swissadme 0.0
Inchi Key DJTVMANCSQLMCX-UHFFFAOYSA-N
Silicos It Class Poorly soluble
Fcsp3 0.1333333333333333
Logs -4.813
Rotatable Bond Count 2.0
Logd 2.853
Synonyms Aloeemodin-emodin bianthrone, Palmidin A, palmidin a
Esol Class Poorly soluble
Functional Groups CO, cC(c)=O, cO
Compound Name Palmidin A
Kingdom Organic compounds
Prediction Hob Swissadme 0.0
Exact Mass 510.131
Formal Charge 0.0
Monoisotopic Mass 510.131
Hydrogen Bond Acceptor Count 8.0
Molecular Weight 510.5
Gi Absorption False
Covalent Unit Count 1.0
Total Atom Stereocenter Count 2.0
Total Bond Stereocenter Count 0.0
Molecular Framework Aromatic homopolycyclic compounds
Lipinski Rule Of 5 False
Esol -6.408556021052633
Inchi InChI=1S/C30H22O8/c1-12-5-16-24(18-9-14(32)10-22(36)28(18)30(38)26(16)20(34)6-12)23-15-3-2-4-19(33)25(15)29(37)27-17(23)7-13(11-31)8-21(27)35/h2-10,23-24,31-36H,11H2,1H3
Smiles CC1=CC2=C(C(=C1)O)C(=O)C3=C(C2C4C5=C(C(=CC=C5)O)C(=O)C6=C4C=C(C=C6O)CO)C=C(C=C3O)O
Nring 6.0
Np Classifier Biosynthetic Pathway Polyketides
Defined Bond Stereocenter Count 0.0
Egan Rule False
Taxonomy Direct Parent Anthracenes
Np Classifier Superclass Polycyclic aromatic polyketides

  • 1. Outgoing r'ship FOUND_IN to/from Berberis Amurensis (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 2. Outgoing r'ship FOUND_IN to/from Berberis Fortunei (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 3. Outgoing r'ship FOUND_IN to/from Berberis Japonica (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 4. Outgoing r'ship FOUND_IN to/from Berberis Poiretii (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 5. Outgoing r'ship FOUND_IN to/from Berberis Thunbergii (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 6. Outgoing r'ship FOUND_IN to/from Coptis Chinensis (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 7. Outgoing r'ship FOUND_IN to/from Coptis Deltoidea (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 8. Outgoing r'ship FOUND_IN to/from Coptis Omeiensis (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 9. Outgoing r'ship FOUND_IN to/from Coptis Teetoides (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 10. Outgoing r'ship FOUND_IN to/from Corydalis Yanhusuo (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 11. Outgoing r'ship FOUND_IN to/from Fibraurea Recisa (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 12. Outgoing r'ship FOUND_IN to/from Phellodendron Amurense (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 13. Outgoing r'ship FOUND_IN to/from Pinus Koraiensis (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 14. Outgoing r'ship FOUND_IN to/from Rheum Officinale (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 15. Outgoing r'ship FOUND_IN to/from Rheum Palmatum (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 16. Outgoing r'ship FOUND_IN to/from Rheum Tanguticum (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 17. Outgoing r'ship FOUND_IN to/from Senna Alexandrina (Plant) Rel Props:Reference:The Ayurvedic Pharmacopoeia of India Part-1 Volume-9
  • 18. Outgoing r'ship FOUND_IN to/from Stephania Viridiflavens (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all
  • 19. Outgoing r'ship FOUND_IN to/from Thalictrum Foliolosum (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all