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2-Carboxyarabinitol

PubChem CID: 5165850

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Compound Synonyms 2-carboxyarabinitol, 2,3,4,5-tetrahydroxy-2-(hydroxymethyl)pentanoic acid, SCHEMBL21313126
Topological Polar Surface Area 138.0
Hydrogen Bond Donor Count 6.0
Heavy Atom Count 13.0
Description 2-carboxyarabinitol is a member of the class of compounds known as hydroxy fatty acids. Hydroxy fatty acids are fatty acids in which the chain bears a hydroxyl group. 2-carboxyarabinitol is soluble (in water) and a weakly acidic compound (based on its pKa). 2-carboxyarabinitol can be found in a number of food items such as tarragon, dandelion, ginkgo nuts, and spinach, which makes 2-carboxyarabinitol a potential biomarker for the consumption of these food products.
Isotope Atom Count 0.0
Molecular Complexity 182.0
Database Name fooddb_chem_all;hmdb_chem_all;pubchem
Defined Atom Stereocenter Count 0.0
Iupac Name 2,3,4,5-tetrahydroxy-2-(hydroxymethyl)pentanoic acid
Nih Violation False
Class Fatty Acyls
Xlogp -3.6
Superclass Lipids and lipid-like molecules
Is Pains False
Subclass Fatty acids and conjugates
Molecular Formula C6H12O7
Inchi Key XONDRGRALZTVKD-UHFFFAOYSA-N
Rotatable Bond Count 5.0
Synonyms 2-C-(Hydroxymethyl)ribonic acid, 2-Carboxyarabinitol, Hamamelonic acid, 2,3,4,5-Tetrahydroxy-2-(hydroxymethyl)pentanoate
Compound Name 2-Carboxyarabinitol
Kingdom Organic compounds
Exact Mass 196.058
Formal Charge 0.0
Brenk Violation False
Monoisotopic Mass 196.058
Hydrogen Bond Acceptor Count 7.0
Molecular Weight 196.16
Covalent Unit Count 1.0
Total Atom Stereocenter Count 3.0
Total Bond Stereocenter Count 0.0
Molecular Framework Aliphatic acyclic compounds
Inchi InChI=1S/C6H12O7/c7-1-3(9)4(10)6(13,2-8)5(11)12/h3-4,7-10,13H,1-2H2,(H,11,12)
Smiles C(C(C(C(CO)(C(=O)O)O)O)O)O
Defined Bond Stereocenter Count 0.0
Taxonomy Direct Parent Hydroxy fatty acids

  • 1. Outgoing r'ship FOUND_IN to/from Artemisia Dracunculus (Plant) Rel Props:Source_db:fooddb_chem_all
  • 2. Outgoing r'ship FOUND_IN to/from Avena Sativa (Plant) Rel Props:Source_db:fooddb_chem_all
  • 3. Outgoing r'ship FOUND_IN to/from Citrus Limon (Plant) Rel Props:Source_db:fooddb_chem_all
  • 4. Outgoing r'ship FOUND_IN to/from Ginkgo Biloba (Plant) Rel Props:Source_db:fooddb_chem_all
  • 5. Outgoing r'ship FOUND_IN to/from Glycine Max (Plant) Rel Props:Source_db:fooddb_chem_all
  • 6. Outgoing r'ship FOUND_IN to/from Hordeum Vulgare (Plant) Rel Props:Source_db:fooddb_chem_all
  • 7. Outgoing r'ship FOUND_IN to/from Mentha Spicata (Plant) Rel Props:Source_db:fooddb_chem_all
  • 8. Outgoing r'ship FOUND_IN to/from Phaseolus Vulgaris (Plant) Rel Props:Source_db:fooddb_chem_all
  • 9. Outgoing r'ship FOUND_IN to/from Spinacia Oleracea (Plant) Rel Props:Source_db:fooddb_chem_all
  • 10. Outgoing r'ship FOUND_IN to/from Taraxacum Officinale (Plant) Rel Props:Source_db:fooddb_chem_all
  • 11. Outgoing r'ship FOUND_IN to/from Zea Mays (Plant) Rel Props:Source_db:fooddb_chem_all