Deoxycytidine
PubChem CID: 13711
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| Compound Synonyms | 2'-deoxycytidine, deoxycytidine, 951-77-9, CYTIDINE, 2'-DEOXY-, Deoxyribose cytidine, Cytosine deoxyriboside, dCYD, 4-Amino-1-((2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)pyrimidin-2(1H)-one, 207121-53-7, Desoxycytidin [German], Desoxycytidin, Doxecitine, d-cytidine, Cytosine, deoxyribonucleoside, 1beta-2'-Deoxyribofuranosylcytosine, d-, EINECS 213-454-1, 4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one, BRN 0087567, CHEBI:15698, 1-(2-Deoxy-beta-D-ribofuranosyl)cytosine, DOXECITINE [INN], DC, 0W860991D6, MFCD00006547, DTXSID70883620, 4-25-00-03662 (Beilstein Handbook Reference), 1-(2-deoxy-.beta.-d-ribofuranosyl)cytosine, 4-Amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-2(1H)-pyrimidinone, 4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,2-dihydropyrimidin-2-one, Desoxycytidine, 56905-41-0, Deoxycytidine, Cytosine deoxyriboside, Deoxyribose cytidine, 2(1H)-Pyrimidinone, 4-amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-, 4-amino-1-(2-deoxy-.beta.-d-erythro-pentofuranosyl)-2(1h)-pyrimidinone, 4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidin-2(1H)-one, 2'-deoxy-cytidine, Deoxyriboside, Cytosine, Deoxyribonucleoside, Cytosine, 2 inverted exclamation marka-Deoxycytidine, deoxy-Cytidine, 2'deoxycytidine, 2-Deoxycytidine, 2' Deoxycytidine, 2-deoxy-Cytidine, 4-amino-1-((2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl)-1,2-dihydropyrimidin-2-one, 4-amino-1-((2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl)pyrimidin-2-one, UNII-0W860991D6, Cytidine, 2'deoxy, Cytidine, 2'-deoxy-, labeled with tritium, Doxecitine (USAN/INN), DOXECITINE [USAN], DEOXYCYTIDINE [INCI], SCHEMBL23178, 2'-dC, CHEMBL66115, MT1621 (dC), DTXCID901023131, HY-D0184, 1beta2'Deoxyribofuranosylcytosine, d, BDBM50367094, HG1097, 2'-Deoxycytidine, >=99% (HPLC), AKOS015896791, AC-8210, DB02594, 1-(2-Deoxy-b-D-ribofuranosyl)cytosine, 4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidin-2-one, NCGC00142493-01, AS-14313, BP-58643, CS-0010105, D3583, MT-1621 COMPONENT 2'-DEOXYCYTIDINE, NS00120718, 1-(2-Deoxy-beta-delta-ribofuranosyl)cytosine, C00881, D12465, EN300-6477283, Q422504, 1-(2-deoxy-beta-D-erythro-pentofuranosyl)-Cytosine, BRD-K91822704-001-01-9, BRD-K91822704-003-07-2, 1-(2-deoxy-beta-delta-erythro-pentofuranosyl)-Cytosine, Z3072884208, 4-Amino-1-(2-deoxy-b-D-erythro-pentofuranosyl)-2(1H)-pyrimidinone, 4-Amino-1-(2-deoxy-beta-delta-erythro-pentofuranosyl)-2(1H)-pyrimidinone, 213-454-1 |
|---|---|
| Topological Polar Surface Area | 108.0 |
| Hydrogen Bond Donor Count | 3.0 |
| Heavy Atom Count | 16.0 |
| Pathway Kegg Map Id | map00240 |
| Description | One of the principal nucleosides of DNA composed of cytosine and deoxyribose. A nucleoside consists of only a pentose sugar linked to a purine or pyrimidine base, without a phosphate group. When N1 is linked to the C1 of deoxyribose, deoxynucleosides and nucleotides are formed from cytosine and deoxyribose, deoxycytidine monophosphate (dCMP), deoxycytidine diphosphate (dCDP), deoxycytidine triphosphate (dCTP). CTP is the source of the cytidine in RNA (ribonucleic acid) and deoxycytidine triphosphate (dCTP) is the source of the deoxycytidine in DNA (deoxyribonucleic acid). [HMDB]. Deoxycytidine is found in many foods, some of which are japanese pumpkin, turmeric, prairie turnip, and kai-lan. |
| Isotope Atom Count | 0.0 |
| Molecular Complexity | 355.0 |
| Database Name | cmaup_ingredients;fooddb_chem_all;npass_chem_all;pubchem |
| Defined Atom Stereocenter Count | 3.0 |
| Enzyme Uniprot Id | P27707, Q546Y9, Q9H0P0, Q9NWZ5 |
| Uniprot Id | P04183, Q9QNF7, P30648, D3ZGQ2, P27158, P27707, P56389, P07650, Q0H0H0, P32320, Q9XZT6, Q03164, Q72547, P09768, n.a. |
| Iupac Name | 4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one |
| Prediction Hob | 1.0 |
| Class | Pyrimidine nucleosides |
| Xlogp | -1.8 |
| Superclass | Nucleosides, nucleotides, and analogues |
| Subclass | Pyrimidine 2'-deoxyribonucleosides |
| Molecular Formula | C9H13N3O4 |
| Prediction Swissadme | 1.0 |
| Inchi Key | CKTSBUTUHBMZGZ-SHYZEUOFSA-N |
| Fcsp3 | 0.5555555555555556 |
| Logs | -0.546 |
| Rotatable Bond Count | 2.0 |
| State | Solid |
| Logd | -1.667 |
| Synonyms | 1-(2-Deoxy-b-D-ribofuranosyl)cytosine, 1-(2-deoxy-beta-D-erythro-pentofuranosyl)-Cytosine, 1-(2-Deoxy-beta-D-ribofuranosyl)cytosine, 1-(2-deoxy-beta-delta-erythro-pentofuranosyl)-Cytosine, 1-(2-Deoxy-beta-delta-ribofuranosyl)cytosine, 2-deoxy-Cytidine, 2'-Deoxycytidine, 4-Amino-1-(2-deoxy-b-D-erythro-pentofuranosyl)-2(1H)-pyrimidinone, 4-Amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-2(1H)-pyrimidinone, 4-Amino-1-(2-deoxy-beta-delta-erythro-pentofuranosyl)-2(1H)-pyrimidinone, 4-amino-1-[(2R,4S,5R)-4-Hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidin-2(1H)-one, Cytosine deoxyribonucleoside, Cytosine deoxyriboside, dC, DCYD, deoxy-Cytidine, Deoxyribose cytidine, Desoxycytidine |
| Substituent Name | Pyrimidine 2'-deoxyribonucleoside, Pyrimidone, Aminopyrimidine, Imidolactam, Pyrimidine, Primary aromatic amine, Hydropyrimidine, Saccharide, Heteroaromatic compound, Oxolane, Secondary alcohol, Oxacycle, Azacycle, Organoheterocyclic compound, Ether, Hydrocarbon derivative, Primary amine, Primary alcohol, Organooxygen compound, Organonitrogen compound, Amine, Alcohol, Aromatic heteromonocyclic compound |
| Compound Name | Deoxycytidine |
| Kingdom | Organic compounds |
| Prediction Hob Swissadme | 1.0 |
| Exact Mass | 227.091 |
| Formal Charge | 0.0 |
| Monoisotopic Mass | 227.091 |
| Hydrogen Bond Acceptor Count | 4.0 |
| Molecular Weight | 227.22 |
| Covalent Unit Count | 1.0 |
| Total Atom Stereocenter Count | 3.0 |
| Total Bond Stereocenter Count | 0.0 |
| Esol | -1.5769639999999998 |
| Inchi | InChI=1S/C9H13N3O4/c10-7-1-2-12(9(15)11-7)8-3-5(14)6(4-13)16-8/h1-2,5-6,8,13-14H,3-4H2,(H2,10,11,15)/t5-,6+,8+/m0/s1 |
| Smiles | C1[C@@H]([C@H](O[C@H]1N2C=CC(=NC2=O)N)CO)O |
| Nring | 2.0 |
| Defined Bond Stereocenter Count | 0.0 |
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FOUND_INto/from Euryale Ferox (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all - 8. Outgoing r'ship
FOUND_INto/from Ginkgo Biloba (Plant) Rel Props:Source_db:cmaup_ingredients;npass_chem_all - 9. Outgoing r'ship
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FOUND_INto/from Trachelospermum Lucidum (Plant) Rel Props:Reference: