iMOTdb

Database of Spatially Interacting Motifs in Proteins

 
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mini@ncbs.res.in


Example sequence

Example 1

>gi|68348200|gb|AAY95806.1 
MMRFAVTLLVGLLLAGCATSRDDSLAPKTVNHVDLKRYQGTWYELARLPMYFQRNCAQSEARYTLLPEGN
VAVLNRCLTPEWKWEEARGTATPQVPGKTDKLWVEFDNWFSRLLPGATKGDYWVLYVSDDYKTAIVGNPN
RRYLWLLSRTKEVNETVREELLSKARQQGYDTTRLIWRVSDSAMAKTSK

Example 2

>gi|70834088
MVAKKWVYYFGGGKADGNKNMKELLGGKGANLAEMVNLGIPVPPGFTITTEACKTYQETETIPQEVADQV
RENVSRVEKEMGAKFGDPTNPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYR
RFITMYADIVMQVGREDFEEALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLF
AAIKAVFRSWGNPRATIYRRMNNITGLLGTAVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVN
AQGEDVVAGIRTPQQINHSLSLRWAKAHGVGEEERRKRYPSMEEAMPENYRLLCDVRKRLENHYRDMQDL
EFTVQDGRLWLLQCRNGKRTIHAAVRIAIDMVNEGLISREEAVLRIDPYQVDHLMHPNLEPGAEKANKPI
GRGLAASPGAAVGQVVFDAESAKEWSGRGKKVIMVRLETSPEDLAGMDAACGILTARGGMTSHAAVVARG
MGKCCVSGCGDMVIRGKSFKLNGSVFREGDYITIDGSKGLIYAGKLKLRSPDLKGSFQTILQWCQEMKRL
GVRTNADTPADAAKARSFGAEGVGLCRTEHMFFEGSRINFIREMILADSASGRKAALDKLLPIQRADFVG
ILRAMRGLPVTIRLLDPPLHEFVPHDAAAQFELAQKLGMPAEKVRNRVNALHELNPMLGHRGCRLGITYP
EIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIE
VPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIA
VTKGRRVKPMLKMGICGEHGGDPATIGFCHKVGLDYVSCSPFRVPVAIVAAAHASIKDRRAAMKARKGFA
AKL

Example 3

>gi|56972255
MHLTADDKKHIKAIWPSVAAHGDKYGGEALHRMFMCAPKTKTYFPDFDFSEHSKHILAHGKKVSDALNEA
CNHLDNIAGCLSKLSDLHAYDLRVDPGNFPLLAHQILVVVAIHFPKQFDPATHKALDKFLVSVSNVLTSK
YR