About the database





EcRBPome is a comprehensive database of Escherichia coli RNA-binding proteins (RBPs). This database documents RBPs identified by genome-wide survey of all known complete E. coli proteomes, as of May 2016 (Ghosh and Sowdhamini, BMC Genomics, 2017). EcRBPome also presents a cross-strain comparative account of these RBPs, as well as the constituent RNA-binding domains (RBDs). The data have been cross-referenced to other databases, to suit the users purpose.
EcRBPome statistics
Number of E.coli strains 614
Number of RNA-binding proteins (RBPs) 11662
Types of RNA-binding domains (RBDs) 325
Average percentage of RBPs in E.coli proteomes 6.05




Please cite us: Ghosh, P., Joshi, A., Guita, N., Offmann, B., & Sowdhamini, R. (2019). EcRBPome: a comprehensive database of all known E. coli RNA-binding proteins. BMC genomics, 20(1), 403. URL: https://doi.org/10.1186/s12864-019-5755-5