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Pfam Domains mapped on to the structure: 5CSC

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00285 Citrate synthase PF00285 PF00285
2 B PF00285 Citrate synthase PF00285 PF00285

Conserved Domain Database Superfamily Annotations: 5CSC

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 5CSC 99858 cd06105 ScCit1-2_like - cl00416
2 5CSC 199305 cl00416 CS_ACL-C_CCL superfamily - -
3 5CSC 199305 cl00416 CS_ACL-C_CCL superfamily - -
Structural Details of PDB entry 5CSC

Structural Details of PDB entry 5CSC

PDBid Chains Hinge Swapped Domain
5CSC A,B A:417-426,B:417-426 A:427-433,B:427-433

Swapped-domain interface residues and interactions:

Chains Residues
A 52, 54, 427, 428, 430, 431, 433,
B 52, 54, 427, 428, 430, 431,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 20, 21, 24, 25, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 53, 57, 58, 123, 126, 127, 130, 131, 132, 134, 135, 139, 142, 143, 146, 147, 149, 150, 158, 239, 241, 243, 246, 247, 250, 251, 253, 254, 255, 256, 260, 263, 264, 267, 268, 270, 271, 272, 273, 276, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426,
B 20, 21, 24, 25, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 53, 57, 123, 126, 127, 130, 131, 132, 134, 135, 139, 142, 143, 146, 147, 149, 150, 158, 164, 239, 241, 243, 246, 247, 250, 251, 253, 254, 255, 256, 260, 263, 264, 267, 268, 270, 271, 272, 273, 276, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:5CSC B:5CSC

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:5CSC.ali
atm file:5CSC.atm
cof file:5CSC.cof
hbd file:5CSC.hbd
html file:5CSC.html
pdb file:5CSC.pdb
ps file:5CSC.ps
psa file:5CSC.psa
rtf file:5CSC.rtf
sst file:5CSC.sst
tem file:5CSC.tem