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Conserved Domain Database Superfamily Annotations: 3PVI

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 3PVI 204169 cl07743 Endonuc-PvuII superfamily - -
Structural Details of PDB entry 3PVI

Structural Details of PDB entry 3PVI

PDBid Chains Hinge Swapped Domain
3PVI A,B A:31-45,B:31-45 A:2-30,B:2-30

Swapped-domain interface residues and interactions:

Chains Residues
A 2, 3, 5, 6, 8, 9, 12, 13, 15, 16, 17, 18, 19, 20, 22, 25, 26, 29, 30, 44, 45, 47, 106,
B 2, 3, 5, 6, 8, 9, 12, 13, 15, 16, 17, 18, 19, 20, 22, 25, 26, 29, 30, 44, 45, 47,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 31, 32, 33, 34, 35, 37, 38, 41, 73, 76, 85, 107, 108, 157,
B 31, 32, 33, 34, 35, 37, 38, 41, 76, 85, 107,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
AGLY(34)ASP, No mutationGLY(34)ASP, No mutation
BGLY(34)ASP, No mutationGLY(34)ASP, No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:3PVI B:3PVI

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:3PVI.ali
atm file:3PVI.atm
cof file:3PVI.cof
hbd file:3PVI.hbd
html file:3PVI.html
pdb file:3PVI.pdb
ps file:3PVI.ps
psa file:3PVI.psa
rtf file:3PVI.rtf
sst file:3PVI.sst
tem file:3PVI.tem