Pfam Domains mapped on to the structure: 3E39
No.
Chain ID
Pfam ID
Pfam Description
Linkout - Pfam
Linkout - CDD
1
A
PF00881
Nitroreductase family
PF00881
PF00881
Conserved Domain Database Superfamily Annotations: 3E39
Structural Details of PDB entry 3E39
Structural Details of PDB entry 3E39
PDBid
Chains
Hinge
Swapped Domain
3E39
A,B
A:168-170,B:168-170
A:171-300,B:171-300
Swapped-domain interface residues and interactions:
Chains
Residues
A
27 , 53 , 172 , 173 , 174 , 177 ,
B
27 , 53 , 172 , 173 ,
Non-swapped-domain interface residues and interactions:
Chains
Residues
A
5 , 6 , 7 , 8 , 10 , 11 , 12 , 14 , 30 , 31 , 32 , 34 , 35 , 36 , 38 , 39 , 40 , 41 , 45 , 47 , 49 , 50 , 51 , 52 , 60 , 94 , 95 , 97 , 98 , 101 , 102 , 105 , 106 , 109 , 110 , 113 , 114 , 120 , 122 , 125 , 126 , 137 , 142 , 145 , 159 , 160 , 161 , 162 , 164 , 167 , 168 , 169 , 170 ,
B
5 , 6 , 7 , 8 , 10 , 11 , 12 , 14 , 30 , 31 , 32 , 34 , 35 , 36 , 38 , 39 , 40 , 41 , 45 , 47 , 49 , 50 , 51 , 52 , 60 , 94 , 95 , 97 , 98 , 101 , 102 , 105 , 106 , 109 , 110 , 113 , 114 , 120 , 122 , 125 , 126 , 137 , 142 , 145 , 159 , 160 , 161 , 162 , 164 , 167 , 168 , 169 , 170 ,
Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.
Mutations in critical regions:
Chains
Hinge
Domain swapped interface
Non-swapped interface
Swapped Domain
A No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output: