Conserved Domain Database Superfamily Annotations: 3DSQ

No.	PDB ID	PSSM ID	CDD Accession	Superfamily Short Name	Linkout - CDD
1	3DSQ	206944	cl00268	class_II_aaRS-like_core	superfamily - -

Structural Details of PDB entry 3DSQ PDBid Chains Hinge Swapped Domain 3DSQ A,B A:92-96,B:92-96 A:8-91,B:1-91 Swapped-domain interface residues and interactions: Chains Residues A 58, 61, 62, 64, 65, 69, 70, 71, 73, 74, 78, 82, 85, 88, 90, 91, 92, B 58, 61, 64, 65, 69, 70, 71, 73, 74, 78, 82, 85, 88, 90, 91, 92, Non-swapped-domain interface residues and interactions: Chains Residues A 93, 94, 95, 96, 97, 119, 120, 121, 125, 127, 134, 137, 138, 141, 142, 145, 146, 156, 159, 170, 171, 275, 276, 277, 280, 285, 287, B 93, 94, 95, 96, 97, 119, 121, 125, 127, 134, 137, 138, 141, 142, 145, 146, 159, 170, 171, 275, 276, 277, 280, 285, 286,

Swapped domains are represented using trasperent spheres. Non-swapped part is represented using light color and cartoon representation. Hinge region is shown in yellow color.

Mutations in critical regions:

Chains	Hinge	Domain swapped interface	Non-swapped interface	Swapped Domain
A	No mutation	No mutation	No mutation	No mutation
B	No mutation	No mutation	No mutation	No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

A:3DSQ

B:3DSQ

JOY Structural annotation for hinge hinge and swapped domain:

Hinge	Swapped domain

JOY output:

ali file:	3DSQ.ali
atm file:	3DSQ.atm
cof file:	3DSQ.cof
hbd file:	3DSQ.hbd
html file:	3DSQ.html
pdb file:	3DSQ.pdb
ps file:	3DSQ.ps
psa file:	3DSQ.psa
rtf file:	3DSQ.rtf
sst file:	3DSQ.sst
tem file:	3DSQ.tem