Pfam Domains mapped on to the structure: 3DI4
No.
Chain ID
Pfam ID
Pfam Description
Linkout - Pfam
Linkout - CDD
1
A
PF09347
Domain of unknown function (DUF1989)
PF09347
PF09347
Conserved Domain Database Superfamily Annotations: 3DI4
Structural Details of PDB entry 3DI4
Structural Details of PDB entry 3DI4
PDBid
Chains
Hinge
Swapped Domain
3DI4
A,B
A:18-25,B:18-25
A:0-17,B:8-17
Swapped-domain interface residues and interactions:
Chains
Residues
A
5 , 6 , 8 , 9 , 12 , 15 , 16 , 17 , 132 , 136 , 215 ,
B
8 , 9 , 12 , 15 , 16 , 17 , 128 , 129 , 131 , 132 , 136 , 215 ,
Non-swapped-domain interface residues and interactions:
Chains
Residues
A
18 , 19 , 20 , 21 , 22 , 23 , 24 , 26 , 28 , 30 , 94 , 96 , 97 , 99 , 100 , 101 , 102 , 103 , 104 , 113 , 116 , 117 , 119 , 133 , 135 , 137 , 138 , 146 , 147 , 148 , 149 , 150 , 151 , 152 , 153 , 154 , 156 , 157 , 158 , 162 , 164 , 168 , 169 , 172 , 173 , 177 , 183 , 184 , 187 , 192 , 202 , 203 , 204 , 205 , 206 , 207 , 208 , 209 , 210 , 212 , 213 , 217 , 244 , 245 , 277 , 278 , 279 , 280 , 281 , 282 , 283 , 284 , 285 ,
B
7 , 18 , 19 , 20 , 21 , 22 , 23 , 24 , 26 , 28 , 30 , 94 , 96 , 97 , 99 , 100 , 101 , 102 , 103 , 104 , 113 , 116 , 117 , 119 , 127 , 133 , 135 , 137 , 138 , 146 , 148 , 149 , 150 , 151 , 152 , 153 , 154 , 156 , 157 , 158 , 162 , 164 , 168 , 169 , 172 , 173 , 177 , 183 , 184 , 187 , 192 , 202 , 203 , 204 , 205 , 206 , 207 , 208 , 209 , 210 , 212 , 213 , 217 , 221 , 244 , 245 , 277 , 278 , 279 , 280 , 281 , 282 , 283 , 284 ,
Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.
Mutations in critical regions:
Chains
Hinge
Domain swapped interface
Non-swapped interface
Swapped Domain
A No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output: