Pfam Domains mapped on to the structure: 3DFU
No.
Chain ID
Pfam ID
Pfam Description
Linkout - Pfam
Linkout - CDD
1
A
PF10728
Domain of unknown function (DUF2520)
PF10728
PF10728
Conserved Domain Database Superfamily Annotations: 3DFU
Structural Details of PDB entry 3DFU
Structural Details of PDB entry 3DFU
PDBid
Chains
Hinge
Swapped Domain
3DFU
A,B
A:176-182,B:176-182
A:183-228,B:183-228
Swapped-domain interface residues and interactions:
Chains
Residues
A
51 , 136 , 137 , 139 , 140 , 144 , 147 , 153 , 175 , 183 , 184 , 188 , 192 , 195 , 197 , 198 , 200 , 201 , 203 , 204 , 205 , 207 , 208 , 209 , 210 , 211 , 212 , 214 , 215 , 229 ,
B
136 , 137 , 139 , 140 , 144 , 147 , 150 , 183 , 184 , 188 , 191 , 192 , 195 , 197 , 198 , 200 , 201 , 203 , 204 , 205 , 207 , 208 , 209 , 210 , 211 , 212 , 214 , 215 ,
Non-swapped-domain interface residues and interactions:
Chains
Residues
A
17 , 76 , 98 , 99 , 100 , 102 , 128 , 130 , 134 , 138 , 141 , 142 , 143 , 145 , 146 , 148 , 149 , 150 , 151 , 152 , 154 , 155 , 158 , 159 , 161 , 162 , 163 , 168 , 171 , 172 , 173 , 176 , 177 , 180 ,
B
51 , 98 , 99 , 100 , 102 , 128 , 130 , 134 , 138 , 141 , 142 , 143 , 145 , 146 , 148 , 149 , 151 , 152 , 153 , 154 , 155 , 158 , 159 , 162 , 163 , 168 , 171 , 172 , 173 , 175 , 176 , 177 , 178 , 180 , 181 ,
Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.
Mutations in critical regions:
Chains
Hinge
Domain swapped interface
Non-swapped interface
Swapped Domain
A No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output: