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Pfam Domains mapped on to the structure: 3DFU

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF10728 Domain of unknown function (DUF2520) PF10728 PF10728

Conserved Domain Database Superfamily Annotations: 3DFU

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 3DFU 212616 cl09931 NADB_Rossmann superfamily - -
2 3DFU 204549 cl11323 DUF2520 superfamily - -
Structural Details of PDB entry 3DFU

Structural Details of PDB entry 3DFU

PDBid Chains Hinge Swapped Domain
3DFU A,B A:176-182,B:176-182 A:183-228,B:183-228

Swapped-domain interface residues and interactions:

Chains Residues
A 51, 136, 137, 139, 140, 144, 147, 153, 175, 183, 184, 188, 192, 195, 197, 198, 200, 201, 203, 204, 205, 207, 208, 209, 210, 211, 212, 214, 215, 229,
B 136, 137, 139, 140, 144, 147, 150, 183, 184, 188, 191, 192, 195, 197, 198, 200, 201, 203, 204, 205, 207, 208, 209, 210, 211, 212, 214, 215,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 17, 76, 98, 99, 100, 102, 128, 130, 134, 138, 141, 142, 143, 145, 146, 148, 149, 150, 151, 152, 154, 155, 158, 159, 161, 162, 163, 168, 171, 172, 173, 176, 177, 180,
B 51, 98, 99, 100, 102, 128, 130, 134, 138, 141, 142, 143, 145, 146, 148, 149, 151, 152, 153, 154, 155, 158, 159, 162, 163, 168, 171, 172, 173, 175, 176, 177, 178, 180, 181,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:3DFU B:3DFU

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:3DFU.ali
atm file:3DFU.atm
cof file:3DFU.cof
hbd file:3DFU.hbd
html file:3DFU.html
pdb file:3DFU.pdb
ps file:3DFU.ps
psa file:3DFU.psa
rtf file:3DFU.rtf
sst file:3DFU.sst
tem file:3DFU.tem